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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 7
First Previous 1-7 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ207826 wh5i23 2002 5' Spike at meiosis 504bp Contig12984 Contig12984 Q9M573 GO:0003735 structural constituent of ribosome Os04g0441900 [Oryza sativa (japonica cultivar-group)] 107 0.00123257
BJ215112 rwh5i23 2002 3' Spike at meiosis 466bp Contig12984 Contig12984 P05621 P29435 P29435 P29435 GO:0003677 GO:0003916 GO:0005524 GO:0016853 DNA binding ,  DNA topoisomerase activity ,  ATP binding ,  isomerase activity Os04g0441900 [Oryza sativa (japonica cultivar-group)] 107 0.00109409
BJ291107 whsl21l15 2002 5' Seed DPA30 472bp Contig12984 Contig12984 P51683 P51683 P51683 GO:0004930 GO:0007186 GO:0016021 G-protein coupled receptor activity ,  G-protein coupled receptor protein signaling pathway ,  integral to membrane Os04g0441900 [Oryza sativa (japonica cultivar-group)] 654 4.15474e-67
BJ230146 rwhdl21j07 2002 3' Crown of seedling 665bp Contig12984 Contig12984 P51683 P51683 P51683 GO:0004930 GO:0007186 GO:0016021 G-protein coupled receptor activity ,  G-protein coupled receptor protein signaling pathway ,  integral to membrane Os04g0441900 [Oryza sativa (japonica cultivar-group)] 660 1.90741e-67
BJ231211 rwhdl25o10 2002 3' Crown of seedling 392bp Contig12984 Contig12984 P36941 P36941 P36941 GO:0004872 GO:0006915 GO:0016021 receptor activity ,  apoptosis ,  integral to membrane Os04g0441900 [Oryza sativa (japonica cultivar-group)] 114 3.2754e-12
BJ301344 whyd10c07 2002 5' Spikelet at late flowering 399bp Contig12984 Contig12984 P29435 P29435 P29435 GO:0003916 GO:0005524 GO:0016853 DNA topoisomerase activity ,  ATP binding ,  isomerase activity Os04g0441900 [Oryza sativa (japonica cultivar-group)] 142 9.83724e-08
BJ307142 rwhyd10c07 2002 3' Spikelet at late flowering 412bp Contig12984 Contig12984 P29435 P29435 P29435 GO:0003916 GO:0005524 GO:0016853 DNA topoisomerase activity ,  ATP binding ,  isomerase activity Os04g0441900 [Oryza sativa (japonica cultivar-group)] 81 1.1413
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