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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 37
First Previous 1-37 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whr_4082_a18f 2012 5' Root 438bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 288 5.47357e-76
whr_1097_n18f 2012 5' Root 545bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 343 1.34725e-92
whr_1088_n18r 2012 3' Root 508bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 249 2.19212e-64
whr_21048_p21f 2012 5' Root 578bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 358 8.27262e-97
whr_21048_p21r 2012 3' Root 424bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 181 9.62499e-44
whrd_20014_d03r 2012 3' Root of dessiccated seed 561bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 319 2.99856e-85
whxa_21071_j17f 2012 5' Root 672bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 392 4.40515e-107
whxa_21071_j17r 2012 3' Root 592bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 324 8.41862e-87
whxb_20033_p10f 2012 5' Root 479bp Contig8504       tonoplastintrinsicprotein[Triticumaestivum] 296 2.6287e-78
whxb_20033_p10r 2012 3' Root 584bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 314 8.30354e-84
whxd_24029_c05r 2012 3' Root, treated at 50 microM Al for 6h 570bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 303 1.75737e-80
whxd_18071_j17f 2012 5' Root, treated at 50 microM Al for 6h 500bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 309 2.99633e-82
whxd_18071_j17r 2012 3' Root, treated at 50 microM Al for 6h 596bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 324 8.55016e-87
whxd_33088_j24f 2012 5' Root, treated at 50 microM Al for 6h 643bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 349 3.90216e-94
whxd_33088_j24r 2012 3' Root, treated at 50 microM Al for 6h 201bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 107 1.33815e-21
HX148039 whxs_15077_d17f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 540bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 336 2.11701e-90
HX148062 whxs_15077_d17r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 630bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 357 1.36035e-96
HX154211 whxs_8072_i20f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 751bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 474 1.92622e-131
HX157257 whxs_9022_l07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 718bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 437 2.37643e-120
HX164137 whxt_5095_a21f 2012 5' Roots, 18 day old plants were grown hydroponically 753bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 479 6.04131e-133
HX164164 whxt_5095_a21r 2012 3' Roots, 18 day old plants were grown hydroponically 770bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 390 2.24847e-106
HX167115 whxt_26030_d07f 2012 5' Roots, 18 day old plants were grown hydroponically 756bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 481 9.40288e-134
HX167140 whxt_26030_d07r 2012 3' Roots, 18 day old plants were grown hydroponically 657bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 321 1.56152e-85
HX168068 whxt_11011_e02f 2012 5' Roots, 18 day old plants were grown hydroponically 776bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 473 2.68233e-131
HX168095 whxt_11011_e02r 2012 3' Roots, 18 day old plants were grown hydroponically 717bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
HX171265 whxt_30058_g15f 2012 5' Roots, 18 day old plants were grown hydroponically 757bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 476 3.0248e-132
HX171293 whxt_30058_g15r 2012 3' Roots, 18 day old plants were grown hydroponically 717bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
HX174586 whxt_15024_j08f 2012 5' Roots, 18 day old plants were grown hydroponically 772bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 474 2.01956e-131
HX174612 whxt_15024_j08r 2012 3' Roots, 18 day old plants were grown hydroponically 718bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
HX179440 whxt_26020_n07f 2012 5' Roots, 18 day old plants were grown hydroponically 772bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 476 3.11573e-132
HX179467 whxt_26020_n07r 2012 3' Roots, 18 day old plants were grown hydroponically 626bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 324 9.68765e-87
HX182903 whxu_17016_a03f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 735bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 474 1.40902e-131
HX182921 whxu_17016_a03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 709bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 409 4.00267e-112
HX186989 whxu_9061_d14f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 760bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 460 1.73265e-127
HX187016 whxu_9061_d14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 647bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 319 4.3791e-85
HX195810 whxu_26086_k24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 694bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 437 2.22409e-120
HX195837 whxu_26086_k24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 694bp Contig8504       tonoplastintrinsicprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
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