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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 48
First Previous 1-48 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_11090_d12f 2012 5' Seed DPA10 520bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 182 5.86656e-44
whe_11090_d12r 2012 3' Seed DPA10 326bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 126 2.79402e-27
whkv_8017_o06f 2012 5' Shoot grown with continuous light after cold treatment 589bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.69696e-45
whkv_8017_o06r 2012 3' Shoot grown with continuous light after cold treatment 555bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.23667e-45
whsd_16063_a14f 2012 5' Shoot grown with dessication 502bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.70932e-45
whsd_16063_a14r 2012 3' Shoot grown with dessication 485bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.75706e-45
whv3_20096_a23f 2012 5' Shoot grown under cold condition for 3days 210bp Contig8369       hypotheticalproteinTCSYLVIO_9207[Trypanosomacruzi] 35 8.38458
whv3_20096_a23r 2012 3' Shoot grown under cold condition for 3days 161bp Contig8369            
whva_9053_i10f 2012 5' Shoot with ABA treatment 507bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.75315e-45
whva_9053_i10r 2012 3' Shoot with ABA treatment 510bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.74499e-45
whvh_13047_a09f 2012 5' Shoot with heat shock treatment 518bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.82367e-45
whvh_13047_a09r 2012 3' Shoot with heat shock treatment 480bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71976e-45
whxa_14028_f08f 2012 5' Root 291bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 158 5.12422e-37
whxa_14028_f08r 2012 3' Root 516bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.82367e-45
whxa_6023_j06f 2012 5' Root 418bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.7125e-45
whxa_6023_j06r 2012 3' Root 501bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71728e-45
whxb_15063_a13f 2012 5' Root 450bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.73488e-45
whxb_15063_a13r 2012 3' Root 436bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71737e-45
whxb_8004_n04f 2012 5' Root 546bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.15064e-45
whxb_8004_n04r 2012 3' Root 299bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 86 2.44795e-15
whxb_3033_o10f 2012 5' Root 536bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.03119e-45
whxb_3033_o10r 2012 3' Root 276bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 77 1.92486e-12
whxc_5016_a03f 2012 5' Root, treated at 50 microM Al for 6h 500bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 185 6.52565e-45
whxc_5016_a03r 2012 3' Root, treated at 50 microM Al for 6h 450bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.73488e-45
whxc_12063_b14f 2012 5' Root, treated at 50 microM Al for 6h 507bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.74499e-45
whxc_12063_b14r 2012 3' Root, treated at 50 microM Al for 6h 485bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.75706e-45
whxc_31075_e18f 2012 5' Root, treated at 50 microM Al for 6h 425bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.74674e-45
whxc_31075_e18r 2012 3' Root, treated at 50 microM Al for 6h 440bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71002e-45
whxc_15044_f12f 2012 5' Root, treated at 50 microM Al for 6h 481bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71976e-45
whxc_15044_f12r 2012 3' Root, treated at 50 microM Al for 6h 439bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71002e-45
whxc_18087_i21f 2012 5' Root, treated at 50 microM Al for 6h 496bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.72523e-45
whxc_18087_i21r 2012 3' Root, treated at 50 microM Al for 6h 474bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.73526e-45
whxc_34070_k19f 2012 5' Root, treated at 50 microM Al for 6h 432bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.73206e-45
whxc_34070_k19r 2012 3' Root, treated at 50 microM Al for 6h 313bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 104 1.45473e-20
whxd_14077_c18f 2012 5' Root, treated at 50 microM Al for 6h 537bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.03119e-45
whxd_15077_c18f 2012 5' Root, treated at 50 microM Al for 6h 479bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 181 9.43662e-44
HX004093 whxi_17057_g14f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 376bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.7468e-45
HX012019 whxj_15045_d10f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 491bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.74115e-45
HX012020 whxj_16045_d10f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 51bp Contig8369            
HX012032 whxj_15045_d10r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 308bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 104 1.46551e-20
HX145796 whxs_28080_b19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 532bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.98797e-45
HX145820 whxs_28080_b19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 507bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 179 3.65554e-43
HX149934 whxs_25028_f07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 516bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.78025e-45
HX149960 whxs_25028_f07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 499bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.72523e-45
HX153127 whxs_30090_h23f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 411bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.71964e-45
HX153150 whxs_30090_h23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 404bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 1.74106e-45
HX163215 whxt_25016_a03f 2012 5' Roots, 18 day old plants were grown hydroponically 563bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.36571e-45
HX163239 whxt_25016_a03r 2012 3' Roots, 18 day old plants were grown hydroponically 538bp Contig8369       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 187 2.07441e-45
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