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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 20
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_9015_a01f 2012 5' Callus 343bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 52 5.18862e-05
whcs_9015_a01r 2012 3' Callus 311bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 83 3.48339e-14
whcs_9015_a02f 2012 5' Callus 334bp Contig8329       Os12g0135900[OryzasativaJaponicaGroup] 45 0.00619743
whcs_9015_a02r 2012 3' Callus 329bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 83 3.52938e-14
whdl_21022_j08f 2012 5' Crown of seedling 515bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 291 8.75372e-77
whdl_21022_j08r 2012 3' Crown of seedling 554bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 275 6.24502e-72
whf_27061_k22r 2012 3' Spike at flowering date 529bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 255 3.33326e-66
whms_9036_n12f 2012 5' Seed DPA5 of DT3DL CS wheat 653bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 308 1.03479e-81
whms_9036_n12r 2012 3' Seed DPA5 of DT3DL CS wheat 617bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 269 6.05279e-70
whxa_19016_b03f 2012 5' Root 577bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 308 7.51706e-82
whxa_20016_b03f 2012 5' Root 318bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 194 8.44816e-48
whxa_19016_b03r 2012 3' Root 578bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 174 1.29717e-41
whxa_11077_d17f 2012 5' Root 350bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 204 1.05879e-50
whxa_11077_d17r 2012 3' Root 657bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 308 1.04741e-81
whxc_17019_m05f 2012 5' Root, treated at 50 microM Al for 6h 608bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 308 8.62245e-82
whxc_17019_m05r 2012 3' Root, treated at 50 microM Al for 6h 572bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 174 1.2532e-41
whyd_12029_k08f 2012 5' Spikelet at late flowering 423bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 229 2.35975e-58
whyd_13029_k08f 2012 5' Spikelet at late flowering 441bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 229 2.36437e-58
whyd_12029_k08r 2012 3' Spikelet at late flowering 472bp Contig8329       PREDICTED:probable39SribosomalproteinL24,mitochondrial-like[Brachypodiumdistachyon] 163 1.58015e-38
whyd_13029_k08r 2012 3' Spikelet at late flowering 318bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 116 2.23872e-24
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