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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 38
First Previous 1-38 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_10061_d13f 2012 5' Seed DPA20 555bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 2.41874e-71
whdp_10061_d13r 2012 3' Seed DPA20 508bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 6.87809e-50
whe_24018_b20f 2012 5' Seed DPA10 156bp Contig8292            
whe_24018_b20r 2012 3' Seed DPA10 435bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 4.23002e-44
whei_11039_i10f 2012 5' Dormant seed with water absorption after breaking 481bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 132 5.02699e-29
whei_11039_i10r 2012 3' Dormant seed with water absorption after breaking 451bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.38382e-34
whf_12028_h02f 2012 5' Spike at flowering date 354bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 228 5.20221e-58
whf_12028_h02r 2012 3' Spike at flowering date 372bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 4.95374e-32
whhg_15036_n12r 2012 3' Anther at meiosis of MT4B CS wheat 657bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 2.11535e-74
whms_9008_i03f 2012 5' Seed DPA5 of DT3DL CS wheat 574bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 5.72759e-95
whms_9008_i03r 2012 3' Seed DPA5 of DT3DL CS wheat 567bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 1.71026e-75
whsc_13031_a06f 2012 5' Shoot grown with cold treatment 537bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 1.45611e-89
whsc_13031_a06r 2012 3' Shoot grown with cold treatment 538bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 3.7717e-55
whsc_17090_h23f 2012 5' Shoot grown with cold treatment 159bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 6.9106e-18
whsl_4079_l17f 2012 5' Seed DPA30 160bp Contig8292            
whsl_4078_l17r 2012 3' Seed DPA30 182bp Contig8292            
whsp_3025_g06f 2012 5' 586bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 6.15803e-79
whsp_3025_g06r 2012 3' 581bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.95302e-69
whsp_4033_p10r 2012 3' 287bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.96785e-12
whsp_4081_p21r 2012 3' 287bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.96785e-12
whvs_17043_f09r 2012 3' Liquid cultured tissue 88bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 1.09504e-07
whvs_20058_h16r 2012 3' Liquid cultured tissue 602bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.38265e-76
whvs_15083_m22f 2012 5' Liquid cultured tissue 721bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 468 9.7202e-130
whxa_24014_c03f 2012 5' Root 654bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.4189e-70
whxb_38064_b15r 2012 3' Root 648bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 2.40847e-75
whxb_6041_g09f 2012 5' Root 651bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 2.43858e-75
whxb_32018_p08f 2012 5' Root 606bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 6.5562e-106
whxb_32018_p08r 2012 3' Root 623bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 3.5338e-65
whxd_4017_o05f 2012 5' Root, treated at 50 microM Al for 6h 637bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 6.8993e-112
whxd_4017_o05r 2012 3' Root, treated at 50 microM Al for 6h 601bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.8142e-60
HX044797 whxm_12042_h12f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 346bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.36059e-52
HX163271 whxt_4016_a04f 2012 5' Roots, 18 day old plants were grown hydroponically 745bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 447 1.45188e-123
HX163298 whxt_4016_a04r 2012 3' Roots, 18 day old plants were grown hydroponically 748bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 2.22959e-87
HX163343 whxt_28031_a05r 2012 3' Roots, 18 day old plants were grown hydroponically 730bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 1.03738e-86
HX168237 whxt_16027_e05f 2012 5' Roots, 18 day old plants were grown hydroponically 676bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 427 2.13199e-117
HX168262 whxt_16027_e05r 2012 3' Roots, 18 day old plants were grown hydroponically 775bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 8.72939e-90
HX185706 whxu_28046_c12f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 770bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 6.10899e-112
HX185731 whxu_28046_c12r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 762bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 3.21478e-97
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