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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 19
First Previous 1-19 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_16023_i06r 2012 3' Seed DPA20 107bp Contig8254            
whem_4044_f11r 2012 3' Dormant seed with water absorption 316bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.83139e-26
whh_17042_d15f 2012 5' Spike at heading date 398bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.82494e-26
whh_17043_d15r 2012 3' Spike at heading date 215bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 8.01139e-19
whpc_15081_p21r 2012 3' Anther at meiosis 97bp Contig8254       hypotheticalproteinSORBIDRAFT_03g020186[Sorghumbicolor] 60 1.85682e-07
whsc_9061_d13r 2012 3' Shoot grown with cold treatment 409bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.80267e-26
whsc_14033_o10f 2012 5' Shoot grown with cold treatment 394bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.83236e-26
whsc_14033_o10r 2012 3' Shoot grown with cold treatment 350bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.81864e-26
whsh_7094_l18r 2012 3' - 290bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.01972e-25
whv_167049_p13f 2012 5' Shoot grown under cold condition for 16days 654bp Contig8254       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 284 1.60015e-74
whxa_24031_a05f 2012 5' Root 414bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.78782e-26
whxa_25031_a05r 2012 3' Root 81bp Contig8254            
whxa_24031_a06f 2012 5' Root 411bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.79525e-26
whxa_24031_a06r 2012 3' Root 389bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.78722e-26
whxd_20064_b16r 2012 3' Root, treated at 50 microM Al for 6h 401bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.81751e-26
HX097133 whxp_10087_i22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 173bp Contig8254            
HX104949 whxp_28050_o15f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 372bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 6.51045e-24
HX183275 whxu_24047_a10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 338bp Contig8254       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.78389e-26
whxv_3032_b08r 2012 3' Leaves, plant was grown at constant 23℃ 738bp Contig8254       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 217 4.09244e-54
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