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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 13
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxc_33062_c15f 2012 5' Root, treated at 50 microM Al for 6h 267bp Contig8231       PREDICTED:probableATP-dependentRNAhelicaseDDX28-like[Oreochromisniloticus] 35 6.49103
whxc_33062_c15r 2012 3' Root, treated at 50 microM Al for 6h 221bp Contig8231            
whxc_25078_d19r 2012 3' Root, treated at 50 microM Al for 6h 344bp Contig8231       PREDICTED:elongationfactor1-delta1-like[Brachypodiumdistachyon] 98 8.24543e-19
whxc_9028_f08f 2012 5' Root, treated at 50 microM Al for 6h 518bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 201 7.15477e-50
whxc_9028_f08r 2012 3' Root, treated at 50 microM Al for 6h 503bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 226 1.94667e-57
whxc_4058_g16f 2012 5' Root, treated at 50 microM Al for 6h 617bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 362 5.25354e-98
whxc_4058_g16r 2012 3' Root, treated at 50 microM Al for 6h 560bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 260 1.26567e-67
whxc_4051_n13f 2012 5' Root, treated at 50 microM Al for 6h 47bp Contig8231       PREDICTED:elongationfactor1-delta1-like[Brachypodiumdistachyon] 36 1.75348
whxc_4051_n13r 2012 3' Root, treated at 50 microM Al for 6h 589bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 304 1.14065e-80
whxc_16001_p01f 2012 5' Root, treated at 50 microM Al for 6h 526bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 302 3.9636e-80
whxc_16001_p01r 2012 3' Root, treated at 50 microM Al for 6h 561bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 263 1.95264e-68
whxc_25049_p13f 2012 5' Root, treated at 50 microM Al for 6h 394bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 130 2.55685e-28
whxc_25049_p13r 2012 3' Root, treated at 50 microM Al for 6h 348bp Contig8231       PREDICTED:elongationfactor1-delta1-like[Brachypodiumdistachyon] 98 8.21394e-19
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