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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 129
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_5066_b05f 2012 5' Crown of seedling 443bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 173 2.62627e-41
whdl_5066_b05r 2012 3' Crown of seedling 337bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09749e-43
whdl_4095_l18r 2012 3' Crown of seedling 360bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 176 3.04024e-42
whdl_4094_l18f 2012 5' Crown of seedling 272bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 172 5.76246e-41
whdp_8065_p18f 2012 5' Seed DPA20 501bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09923e-43
whe_13026_c02f 2012 5' Seed DPA10 501bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.08951e-43
whe_1022_j20f 2012 5' Seed DPA10 488bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.13813e-43
whe_1022_j20r 2012 3' Seed DPA10 359bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 178 8.0319e-43
whe_24094_l24f 2012 5' Seed DPA10 515bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.17621e-43
whe_24094_l24r 2012 3' Seed DPA10 434bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.10832e-43
whe_1071_m05f 2012 5' Seed DPA10 515bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.17621e-43
whe_20071_m05r 2012 3' Seed DPA10 308bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 146 1.97153e-33
whms_7061_c14r 2012 3' Seed DPA5 of DT3DL CS wheat 531bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.43013e-43
whoh_16059_g16f 2012 5' Pistil at heading date 517bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 173 1.55958e-41
whoh_16059_g16r 2012 3' Pistil at heading date 440bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09036e-43
whok_10048_b11f 2012 5' Seed DPA5 515bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.17621e-43
whok_10048_b11r 2012 3' Seed DPA5 454bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.12075e-43
whr_24057_c10r 2012 3' Root 251bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 88 6.33333e-16
whr_9075_g23f 2012 5' Root 501bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 178 7.97707e-43
whr_9076_g23r 2012 3' Root 343bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.08951e-43
whsc_11042_g11r 2012 3' Shoot grown with cold treatment 449bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 142 3.76849e-32
whsc_13068_n19f 2012 5' Shoot grown with cold treatment 515bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.17621e-43
whsc_13068_n19r 2012 3' Shoot grown with cold treatment 442bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14843e-43
whsd_13028_f08f 2012 5' Shoot grown with dessication 514bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.17621e-43
whsd_15090_h24f 2012 5' Shoot grown with dessication 48bp Contig8229            
whsd_1072_i19f 2012 5' Shoot grown with dessication 387bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 69 3.07506e-10
whsp_14005_k01f 2012 5' 491bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.12841e-43
whsp_14005_k01r 2012 3' 466bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14016e-43
whvh_13015_b02f 2012 5' Shoot with heat shock treatment 473bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.12121e-43
whvh_13015_b02r 2012 3' Shoot with heat shock treatment 456bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.11152e-43
whvh_14016_b03f 2012 5' Shoot with heat shock treatment 439bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 168 4.81907e-40
whvh_14016_b03r 2012 3' Shoot with heat shock treatment 403bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.13703e-43
whvs_11044_f12r 2012 3' Liquid cultured tissue 601bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 3.38526e-43
whvs_7087_i21f 2012 5' Liquid cultured tissue 130bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 93 1.9912e-17
whvs_7087_i21r 2012 3' Liquid cultured tissue 440bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09036e-43
whvs_7001_p02f 2012 5' Liquid cultured tissue 736bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 5.54394e-43
whvs_7001_p02r 2012 3' Liquid cultured tissue 698bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 4.95189e-43
whxa_12089_h21f 2012 5' Root 419bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.1532e-43
whxa_12089_h21r 2012 3' Root 466bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14964e-43
whxa_10056_j16r 2012 3' Root 64bp Contig8229       Os06g0246000[OryzasativaJaponicaGroup] 41 0.0949204
whxa_16001_o01f 2012 5' Root 48bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 39 0.376868
whxc_7004_m03f 2012 5' Root, treated at 50 microM Al for 6h 290bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 72 6.30767e-11
whxc_7004_m03r 2012 3' Root, treated at 50 microM Al for 6h 278bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 99 2.76322e-19
whxc_31002_o04f 2012 5' Root, treated at 50 microM Al for 6h 292bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 159 3.90936e-37
whxc_31002_o04r 2012 3' Root, treated at 50 microM Al for 6h 273bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 105 6.60034e-21
whxd_10084_n23f 2012 5' Root, treated at 50 microM Al for 6h 554bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.73414e-43
whxd_10084_n23r 2012 3' Root, treated at 50 microM Al for 6h 512bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.12313e-43
whxe_3015_a01f 2012 5' Seedling, infected with leaf rust 453bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 165 7.05988e-39
whxe_4015_a01f 2012 5' Seedling, infected with leaf rust 454bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 167 1.42252e-39
whxe_5015_a01f 2012 5' Seedling, infected with leaf rust 454bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 167 1.42252e-39
whxe_3015_a01r 2012 3' Seedling, infected with leaf rust 295bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 116 2.22502e-24
whxe_4015_a01r 2012 3' Seedling, infected with leaf rust 392bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09293e-43
whxe_5015_a01r 2012 3' Seedling, infected with leaf rust 384bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.10988e-43
whxe_14032_a07f 2012 5' Seedling, infected with leaf rust 345bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14658e-43
whxe_15032_a07f 2012 5' Seedling, infected with leaf rust 204bp Contig8229            
whxe_30079_b17f 2012 5' Seedling, infected with leaf rust 618bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 3.74982e-43
whxe_30079_b17r 2012 3' Seedling, infected with leaf rust 571bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.93049e-43
whxe_37027_f05f 2012 5' Seedling, infected with leaf rust 503bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.08951e-43
whxe_38027_f05f 2012 5' Seedling, infected with leaf rust 502bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.08951e-43
whxe_37027_f05r 2012 3' Seedling, infected with leaf rust 467bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14016e-43
whxe_38027_f05r 2012 3' Seedling, infected with leaf rust 467bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 172 5.82822e-41
whxe_20055_j13r 2012 3' Seedling, infected with leaf rust 461bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09307e-43
whxe_32021_k06f 2012 5' Seedling, infected with leaf rust 585bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 3.19214e-43
whxe_33021_k06f 2012 5' Seedling, infected with leaf rust 490bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 177 1.05632e-42
whxe_32021_k06r 2012 3' Seedling, infected with leaf rust 538bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.53579e-43
whxe_33021_k06r 2012 3' Seedling, infected with leaf rust 370bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 130 1.45339e-28
whxg_16058_g15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 517bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.22929e-43
HX009962 whxi_19082_p23f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 387bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.10141e-43
HX009973 whxi_19082_p23r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 292bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 112 5.48042e-23
HX033907 whxl_7091_f21f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 351bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.13835e-43
HX033921 whxl_7091_f21r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 309bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 122 5.20028e-26
HX039246 whxl_8018_o07f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 487bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.13813e-43
HX039260 whxl_8018_o07r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 297bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 122 5.27679e-26
HX040141 whxl_7066_p20f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 393bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.09293e-43
HX040153 whxl_7066_p20r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 295bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 120 2.01245e-25
HX040431 whxm_3047_a09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 422bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14422e-43
HX040437 whxm_3047_a09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 398bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14576e-43
HX041370 whxm_2095_b22f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 213bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 101 9.46356e-20
HX041371 whxm_3095_b22f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 214bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 101 9.46356e-20
HX041384 whxm_2095_b22r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 368bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 162 3.45129e-38
HX041385 whxm_3095_b22r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 376bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 178 8.11421e-43
HX062277 whxn_34088_i23f 2012 5' Leaves, plant was grown at constant 23Ž 701bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 5.00347e-43
HX062310 whxn_34088_i23r 2012 3' Leaves, plant was grown at constant 23Ž 676bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 4.53923e-43
HX083671 whxo_6065_o17r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 359bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 174 1.1598e-41
HX096464 whxp_35039_i10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 548bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.62898e-43
HX096492 whxp_35039_i10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 513bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.17621e-43
HX105318 whxp_28081_o21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 496bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.10896e-43
HX105349 whxp_28081_o21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 454bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.12075e-43
HX107071 whxq_27031_a05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 568bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.93049e-43
HX107093 whxq_27031_a05r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 534bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.48296e-43
HX116491 whxq_22071_i17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 290bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 72 6.30767e-11
HX116515 whxq_22071_i17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 252bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 83 2.66088e-14
HX116516 whxq_23071_i17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 40bp Contig8229            
HX119772 whxq_11054_l16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 299bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 76 4.32104e-12
HX119797 whxq_11054_l16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 288bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 116 2.92696e-24
HX124313 whxq_19065_p17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 51bp Contig8229       Os06g0246000[OryzasativaJaponicaGroup] 36 2.44279
HX125097 whxr_10047_a10f 2012 5' Roots, 18 day old plants were grown hydroponically 529bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.3773e-43
HX125118 whxr_10047_a10r 2012 3' Roots, 18 day old plants were grown hydroponically 506bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.14308e-43
HX126303 whxr_28047_b10r 2012 3' Roots, 18 day old plants were grown hydroponically 410bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.11085e-43
HX129848 whxr_20043_e10f 2012 5' Roots, 18 day old plants were grown hydroponically 493bp Contig8229       HvB12D[Hordeumvulgaresubsp.vulgare] 180 2.11868e-43
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