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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 295
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_11085_k21f 2012 5' Callus 587bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 211 1.31419e-52
whcs_7066_o19f 2012 5' Callus 83bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 63 2.89868e-08
whdl_19093_k24f 2012 5' Crown of seedling 466bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 193 1.87053e-47
whdl_2071_m23f 2012 5' Crown of seedling 338bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 168 4.8355e-40
whdp_17032_b07f 2012 5' Seed DPA20 76bp Contig7966       hypotheticalproteinSORBIDRAFT_1962s002010[Sorghumbicolor] 52 3.94068e-05
whdp_3029_c06f 2012 5' Seed DPA20 176bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 104 8.58405e-21
whdp_19046_c12f 2012 5' Seed DPA20 377bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 158 6.65325e-37
whdp_19046_c12r 2012 3' Seed DPA20 360bp Contig7966       cytochromeP450like_TBP[Citrulluslanatus] 104 5.01163e-29
whdp_19093_d21f 2012 5' Seed DPA20 535bp Contig7966       cytochromeP450like_TBP[Nicotianatabacum] 183 2.24574e-44
whdp_8044_e12f 2012 5' Seed DPA20 585bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 235 4.98234e-60
whdp_17075_e18r 2012 3' Seed DPA20 568bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 261 7.65836e-68
whdp_9071_j17r 2012 3' Seed DPA20 224bp Contig7966       hypotheticalproteinSORBIDRAFT_0351s002020[Sorghumbicolor] 124 1.07397e-26
whdp_15038_k12f 2012 5' Seed DPA20 315bp Contig7966       hypotheticalproteinSORBIDRAFT_0016s002040[Sorghumbicolor] 154 9.38562e-36
whdp_15086_k23r 2012 3' Seed DPA20 44bp Contig7966            
whdp_4036_m11f 2012 5' Seed DPA20 430bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 239 3.84076e-61
whdp_15004_n04f 2012 5' Seed DPA20 138bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 84 1.56804e-14
whdp_1018_p07f 2012 5' Seed DPA20 454bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 243 2.03987e-62
whdp_16033_p09f 2012 5' Seed DPA20 290bp Contig7966       probablecytochromeP450monooxygenase-maize(fragment) 165 7.15026e-39
whei_4080_b19r 2012 3' Dormant seed with water absorption after breaking 534bp Contig7966       ATPsynthasesubunitbeta[Medicagotruncatula] 142 5.61538e-32
whei_15046_c11f 2012 5' Dormant seed with water absorption after breaking 475bp Contig7966       hypotheticalproteinSORBIDRAFT_0016s002040[Sorghumbicolor] 153 2.76442e-35
whei_15046_c11r 2012 3' Dormant seed with water absorption after breaking 449bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 133 2.98595e-29
whei_6078_d20f 2012 5' Dormant seed with water absorption after breaking 519bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 282 2.44201e-74
whei_6078_d20r 2012 3' Dormant seed with water absorption after breaking 576bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 304 1.08546e-80
whei_11044_e12r 2012 3' Dormant seed with water absorption after breaking 338bp Contig7966       hypotheticalproteinSORBIDRAFT_1962s002010[Sorghumbicolor] 104 4.76694e-26
whei_17042_g11f 2012 5' Dormant seed with water absorption after breaking 149bp Contig7966       hypotheticalproteinSORBIDRAFT_0351s002020[Sorghumbicolor] 98 6.32928e-19
whei_15057_g14r 2012 3' Dormant seed with water absorption after breaking 581bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 209 4.83282e-52
whei_4055_i14f 2012 5' Dormant seed with water absorption after breaking 520bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 228 5.43984e-58
whei_1070_k20f 2012 5' Dormant seed with water absorption after breaking 444bp Contig7966       ATPsynthasesubunitbeta[Medicagotruncatula] 142 4.96444e-32
whem_10015_b01r 2012 3' Dormant seed with water absorption 547bp Contig7966       hypotheticalproteinSORBIDRAFT_1368s002010[Sorghumbicolor] 177 1.30475e-42
whem_2032_b07r 2012 3' Dormant seed with water absorption 353bp Contig7966       hypotheticalproteinSORBIDRAFT_1962s002010[Sorghumbicolor] 104 4.83938e-26
whem_8078_c19r 2012 3' Dormant seed with water absorption 571bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 211 1.18701e-52
whem_9012_e03r 2012 3' Dormant seed with water absorption 582bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 211 1.29299e-52
whem_2044_e11r 2012 3' Dormant seed with water absorption 378bp Contig7966       hypotheticalproteinSORBIDRAFT_1962s002010[Sorghumbicolor] 112 2.46897e-28
whem_7028_f08r 2012 3' Dormant seed with water absorption 562bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 211 1.17137e-52
whem_11043_f09r 2012 3' Dormant seed with water absorption 553bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 209 4.2084e-52
whem_17009_g02r 2012 3' Dormant seed with water absorption 528bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 192 5.91111e-47
whem_1025_h05f 2012 5' Dormant seed with water absorption 200bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 136 2.06646e-30
whem_3087_i22f 2012 5' Dormant seed with water absorption 271bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 174 8.8902e-42
whem_19052_m16f 2012 5' Dormant seed with water absorption 368bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 188 7.67086e-46
whem_20066_o20r 2012 3' Dormant seed with water absorption 554bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 227 1.95035e-57
whem_7033_p10f 2012 5' Dormant seed with water absorption 152bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 95 6.97603e-18
whf_10020_f02f 2012 5' Spike at flowering date 585bp Contig7966       cytochromeP450like_TBP[Nicotianatabacum] 183 2.88717e-44
whf_8084_f24f 2012 5' Spike at flowering date 525bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 168 6.83974e-40
whf_8084_f24r 2012 3' Spike at flowering date 531bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 104 8.93619e-37
whh_20080_o11f 2012 5' Spike at heading date 362bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 180 2.10543e-43
whh_14063_o16f 2012 5' Spike at heading date 120bp Contig7966       hypotheticalprotein[Zeamays] 71 1.39488e-10
whh_14079_o17f 2012 5' Spike at heading date 541bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 183 2.34131e-44
whhg_14095_a22f 2012 5' Anther at meiosis of MT4B CS wheat 535bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 196 3.34805e-48
whkp_10061_c14f 2012 5' Shoot grown under continuous light 386bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 140 2.41962e-31
whkp_10061_c14r 2012 3' Shoot grown under continuous light 351bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 163 2.07116e-38
whms_5015_a01r 2012 3' Seed DPA5 of DT3DL CS wheat 292bp Contig7966       ATPsynthasesubunitbeta[Medicagotruncatula] 139 3.20548e-31
whms_4095_a22f 2012 5' Seed DPA5 of DT3DL CS wheat 407bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 157 1.47126e-36
whms_4095_a22r 2012 3' Seed DPA5 of DT3DL CS wheat 387bp Contig7966       cytochromeP450like_TBP[Citrulluslanatus] 104 5.00109e-29
whoh_14027_g08r 2012 3' Pistil at heading date 299bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 128 5.61733e-28
whpc_20022_k08f 2012 5' Anther at meiosis 147bp Contig7966       CytochromeP450likeTBP[Medicagotruncatula] 61 8.60086e-08
whr_1084_e12f 2012 5' Root 420bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 193 1.44094e-47
whrd_18072_j20r 2012 3' Root of dessiccated seed 624bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 211 1.56107e-52
whsh_10003_e07f 2012 5' - 93bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 60 2.42509e-07
whsl_29027_g02f 2012 5' Seed DPA30 535bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 254 1.01391e-65
whsl_26013_h07r 2012 3' Seed DPA30 279bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 104 1.18302e-30
whsl_1007_j01f 2012 5' Seed DPA30 328bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 104 1.11987e-31
whsl_15039_j21f 2012 5' Seed DPA30 57bp Contig7966       putativesenescence-associatedprotein,partial[Loliumperenne] 42 0.0528652
whsl_1057_p03f 2012 5' Seed DPA30 514bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 180 2.12313e-43
whv_1618037_k10f 2012 5' Shoot grown under cold condition for 16days 497bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 209 3.24611e-52
whv_166067_m18f 2012 5' Shoot grown under cold condition for 16days 641bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 209 6.22279e-52
whv3_2023_i05f 2012 5' Shoot grown under cold condition for 3days 340bp Contig7966       hypotheticalproteinSORBIDRAFT_0016s002040[Sorghumbicolor] 141 1.07974e-31
whva_16025_g05r 2012 3' Shoot with ABA treatment 699bp Contig7966       hypotheticalproteinSORBIDRAFT_1368s002010[Sorghumbicolor] 162 8.26646e-38
whvh_11071_i18r 2012 3' Shoot with heat shock treatment 479bp Contig7966       ATPsynthasesubunitbeta[Medicagotruncatula] 142 4.85776e-32
whvh_8049_o14f 2012 5' Shoot with heat shock treatment 698bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 209 7.62197e-52
whvs_20014_c03f 2012 5' Liquid cultured tissue 236bp Contig7966       putativeCytocromeP450likeproteinprecursor[Phillyrealatifolia] 73 5.70621e-23
whvs_14076_f20r 2012 3' Liquid cultured tissue 714bp Contig7966       hypotheticalproteinMTR_5g051140[Medicagotruncatula] 181 1.78193e-43
whxa_14093_d21f 2012 5' Root 330bp Contig7966       cytochromeP450like_TBP[Nicotianatabacum] 156 3.28049e-36
whxa_11055_j14r 2012 3' Root 67bp Contig7966       hypotheticalproteinSORBIDRAFT_1994s002010[Sorghumbicolor] 39 0.518193
whxa_12019_n06f 2012 5' Root 76bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 52 6.72178e-05
whxb_5025_h05f 2012 5' Root 236bp Contig7966       hypotheticalprotein[Zeamays] 122 4.02626e-26
whxd_22029_c05f 2012 5' Root, treated at 50 microM Al for 6h 308bp Contig7966       hypotheticalproteinSORBIDRAFT_1962s002010[Sorghumbicolor] 108 2.56684e-27
whxe_11032_a08f 2012 5' Seedling, infected with leaf rust 96bp Contig7966       senescence-associatedprotein[MicromonaspusillaCCMP1545] 50 0.000250957
whxe_7029_c05r 2012 3' Seedling, infected with leaf rust 503bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 247 8.15976e-64
whxe_14024_i08r 2012 3' Seedling, infected with leaf rust 591bp Contig7966       hypotheticalproteinSORBIDRAFT_0070s002020[Sorghumbicolor] 209 5.07446e-52
whxe_35087_i22f 2012 5' Seedling, infected with leaf rust 541bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 249 3.47436e-64
whxf_31094_c23f 2012 5' Seedling, infected with leaf rust 551bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 187 2.19365e-45
whxf_32094_c23f 2012 5' Seedling, infected with leaf rust 562bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 194 1.13456e-47
whxf_33092_e24f 2012 5' Seedling, infected with leaf rust 308bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 212 4.99037e-53
whxf_30086_k23f 2012 5' Seedling, infected with leaf rust 464bp Contig7966       hypotheticalproteinSORBIDRAFT_1962s002010[Sorghumbicolor] 118 3.62501e-30
HX000552 whxi_8095_a22f 2012 5' Two-week old seedlingsi22 16L-8Dj 267bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 104 1.11568e-31
HX000553 whxi_9095_a22f 2012 5' Two-week old seedlingsi22 16L-8Dj 295bp Contig7966       cytochromeP450like_TBP[Citrulluslanatus] 104 4.93494e-29
HX002230 whxi_6062_d16f 2012 5' Two-week old seedlingsi22 16L-8Dj 329bp Contig7966       predictedprotein[MicromonaspusillaCCMP1545] 186 2.96021e-45
HX003104 whxi_20011_f02f 2012 5' Two-week old seedlingsi22 16L-8Dj 427bp Contig7966       cytochromeP450like_TBP[Nicotianatabacum] 163 2.05946e-38
HX004444 whxi_19010_h03f 2012 5' Two-week old seedlingsi22 16L-8Dj 403bp Contig7966       PREDICTED:uncharacterizedproteinLOC100793251[Glycinemax] 207 1.24484e-51
HX007970 whxi_2052_m15f 2012 5' Two-week old seedlingsi22 16L-8Dj 428bp Contig7966       cytochromeP450like_TBP[Nicotianatabacum] 163 2.05946e-38
HX013363 whxj_7059_f14f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 130bp Contig7966       hypotheticalproteinOsI_02133[OryzasativaIndicaGroup] 58 9.27097e-07
HX017671 whxj_6020_m08f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 335bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 186 2.93794e-45
HX018136 whxj_8003_n02f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 351bp Contig7966       probablecytochromeP450monooxygenase-maize(fragment) 116 5.53394e-27
HX025177 whxk_18008_i04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 273bp Contig7966       PREDICTED:uncharacterizedproteinLOC100822817[Brachypodiumdistachyon] 160 1.32846e-37
HX027021 whxk_13086_k23f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 400bp Contig7966       cytochromeP450like_TBP[Citrulluslanatus] 101 4.18903e-28
HX028466 whxk_17004_n04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 415bp Contig7966       hypotheticalproteinSORBIDRAFT_1368s002010[Sorghumbicolor] 155 5.52172e-36
HX031247 whxl_19079_b17f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 233bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 102 4.32635e-20
HX031248 whxl_20079_b17f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 248bp Contig7966       hypotheticalproteinMTR_5g051050,partial[Medicagotruncatula] 112 5.36758e-23
HX031260 whxl_19079_b17r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 302bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 104 3.19703e-31
HX031261 whxl_20079_b17r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 320bp Contig7966       uncharacterizedproteinLOC100382981[Zeamays] 104 4.55332e-30
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