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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 11
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ690699 whrd2h21 2003 5' Root of dessiccated seed 660bp Wh_RDr_all.Contig1398 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex 517 7.23526e-51
CJ691715 whrd6h19 2003 5' Root of dessiccated seed 724bp Wh_RDr_all.Contig2308 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Zea mays] 874 3.51608e-92
CJ692145 whrd8d06 2003 5' Root of dessiccated seed 727bp Wh_RDr_all.Contig1837 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Populus trichocarpa] 959 4.93941e-102
CJ692165 whrd8e10 2003 5' Root of dessiccated seed 743bp Wh_RDr_all.Contig1837 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Populus trichocarpa] 1016 1.26848e-108
CJ692222 whrd8h08 2003 5' Root of dessiccated seed 714bp Wh_RDr_all.Contig1837 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Populus trichocarpa] 965 9.59393e-103
CJ583826 rwhrd1n04 2003 3' Root of dessiccated seed 754bp rwhrd1n04 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       Os02g0776700 [Oryza sativa (japonica cultivar-group)] 591 2.50941e-59
CJ584285 rwhrd2h21 2003 3' Root of dessiccated seed 622bp Wh_RDr_all.Contig1398 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex 517 6.29951e-51
CJ585378 rwhrd6h19 2003 3' Root of dessiccated seed 692bp Wh_RDr_all.Contig2308 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Zea mays] 904 1.06656e-95
CJ585821 rwhrd8d06 2003 3' Root of dessiccated seed 765bp Wh_RDr_all.Contig2308 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Zea mays] 1027 7.04097e-110
CJ585840 rwhrd8e10 2003 3' Root of dessiccated seed 689bp Wh_RDr_all.Contig2308 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Zea mays] 841 2.1325e-88
CJ585902 rwhrd8h08 2003 3' Root of dessiccated seed 725bp Wh_RDr_all.Contig2308 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       unknown [Zea mays] 983 8.06838e-105
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