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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 67
First Previous 1-67 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ630268 whcs3b16 2003 5' Callus 809bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       Putative r40c1 protein - rice [Oryza sativa (japonica cultivar-group)] 1306 3.51637e-142
CJ630714 whcs4o04 2003 5' Callus 321bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       ATPase, E1-E2 type:Potassium-translocating P-type ATPase, B subunit [Chlorobium ferrooxidans DSM 13031] 76 4.4211
CJ631597 whcs8g01 2003 5' Callus 882bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1242 1.07815e-134
CJ628137 whcs14f19 2003 5' Callus 795bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 830 5.35279e-87
CJ628222 whcs14k23 2003 5' Callus 867bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1096 1.87023e-121
CJ521657 rwhcs3b16 2003 3' Callus 643bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 727 3.01023e-75
CJ519358 rwhcs14f19 2003 3' Callus 751bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 763 2.82747e-79
CJ519444 rwhcs14k23 2003 3' Callus 720bp Wh_CSEC_all.Contig2087 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 697 1.16524e-71
CJ636954 whdp7m14 2003 5' Seed DPA20 386bp Wh_DPA20_all.Contig2001 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 231 4.62759e-18
CJ633828 whdp16h08 2003 5' Seed DPA20 777bp Wh_DPA20_all.Contig2459 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 963 1.91808e-102
CJ528536 rwhdp7m14 2003 3' Seed DPA20 361bp Wh_DPA20_all.Contig2001 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_000030 [Oryza sativa (japonica cultivar-group)] 294 2.29467e-25
CJ528541 rwhdp7n01 2003 3' Seed DPA20 377bp Wh_DPA20_all.Contig2001 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_000030 [Oryza sativa (japonica cultivar-group)] 294 2.31866e-25
CJ525331 rwhdp16h08 2003 3' Seed DPA20 632bp Wh_DPA20_all.Contig2001 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 638 6.06659e-65
CJ638218 whec12f20 2003 5' Dormant seed with cold treatment after water absorption 789bp Wh_EMC_all.Contig2262 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1016 1.41494e-108
CJ638884 whec14o21 2003 5' Dormant seed with cold treatment after water absorption 668bp Wh_EMC_all.Contig2262 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 903 1.28154e-95
CJ529796 rwhec12f20 2003 3' Dormant seed with cold treatment after water absorption 609bp Wh_EMC_all.Contig2262 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 625 1.79114e-63
CJ530450 rwhec14o21 2003 3' Dormant seed with cold treatment after water absorption 662bp Wh_EMC_all.Contig2262 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 752 4.11572e-78
CJ531646 rwhec19d20 2003 3' Dormant seed with cold treatment after water absorption 495bp Wh_EMC_all.Contig2262 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 547 1.09266e-54
CJ646858 whei6j10 2003 5' Dormant seed with water absorption after breaking 645bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 648 4.46058e-66
CJ643122 whei11p07 2003 5' Dormant seed with water absorption after breaking 631bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       expressed protein [Oryza sativa (japonica cultivar-group)] 853 7.11656e-90
CJ644666 whei18b24 2003 5' Dormant seed with water absorption after breaking 605bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 413 1.25249e-78
CJ538367 rwhei5k22 2003 3' Dormant seed with water absorption after breaking 530bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 594 4.9212e-60
CJ538595 rwhei6j10 2003 3' Dormant seed with water absorption after breaking 607bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 666 3.1117e-68
CJ534795 rwhei11p07 2003 3' Dormant seed with water absorption after breaking 671bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 763 2.22e-79
CJ536390 rwhei18b24 2003 3' Dormant seed with water absorption after breaking 663bp Wh_EMI_all.Contig2073 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 736 2.9359e-76
CJ649291 whem16g01 2003 5' Dormant seed with water absorption 590bp Wh_EM_all.Contig2184 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 778 2.98567e-81
CJ541073 rwhem16g01 2003 3' Dormant seed with water absorption 666bp Wh_EM_all.Contig2184 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 742 5.98064e-77
CJ657307 whhg10e01 2003 5' Anther at meiosis of MT4B CS wheat 894bp Wh_HGCPCDAM_all.Contig1755 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1131 4.05595e-122
CJ549594 rwhhg10e01 2003 3' Anther at meiosis of MT4B CS wheat 723bp Wh_HGCPCDAM_all.Contig1755 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 769 5.21841e-80
CJ671798 whkv7d24 2003 5' Shoot grown with continuous light after cold treatment 522bp Wh_KMV_all.Contig479 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 518 3.00916e-51
CJ564706 rwhkv7d24 2003 3' Shoot grown with continuous light after cold treatment 487bp Wh_KMV_all.Contig479 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 536 2.01823e-53
CJ675463 whms20e14 2003 5' Seed DPA5 of DT3DL CS wheat 654bp Wh_MS_all.Contig1768 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 1019 4.40935e-109
CJ680151 whok19e07 2003 5' Seed DPA5 804bp Wh_OKCS_all.Contig1104 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1060 6.48173e-115
CJ573350 rwhok19e07 2003 3' Seed DPA5 813bp Wh_OKCS_all.Contig1367 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 249 1.30439e-19
CJ686257 whpc5c16 2003 5' Anther at meiosis 875bp Wh_PCDAM_all.Contig1733 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1177 3.18394e-130
CJ687334 whpc9m22 2003 5' Anther at meiosis 867bp Wh_PCDAM_all.Contig1733 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1189 1.46081e-128
CJ579732 rwhpc5c16 2003 3' Anther at meiosis 643bp Wh_PCDAM_all.Contig1733 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 558 1.2034e-55
CJ580849 rwhpc9m22 2003 3' Anther at meiosis 748bp Wh_PCDAM_all.Contig1733 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 775 1.12865e-80
CJ689280 whrd17f13 2003 5' Root of dessiccated seed 763bp Wh_RDr_all.Contig2530 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1022 2.6881e-109
CJ582837 rwhrd17f13 2003 3' Root of dessiccated seed 673bp Wh_RDr_all.Contig2530 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 781 1.81608e-81
CJ695274 whsc1e20 2003 5' Shoot grown with cold treatment 729bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 984 6.2339e-105
CJ696491 whsc4p16 2003 5' Shoot grown with cold treatment 828bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 944 1.5483e-105
CJ693799 whsc14l14 2003 5' Shoot grown with cold treatment 760bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1133 3.58662e-122
CJ694135 whsc16b14 2003 5' Shoot grown with cold treatment 790bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 961 3.80011e-103
CJ694384 whsc17a05 2003 5' Shoot grown with cold treatment 748bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1134 2.67809e-122
CJ695091 whsc19j23 2003 5' Shoot grown with cold treatment 371bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       expressed protein [Oryza sativa (japonica cultivar-group)] 583 6.9584e-59
CJ697628 whsc9f18 2003 5' Shoot grown with cold treatment 787bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1033 1.51174e-110
CJ697759 whsc9n14 2003 5' Shoot grown with cold treatment 633bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 593 1.00229e-59
CJ587571 rwhsc14l14 2003 3' Shoot grown with cold treatment 559bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 638 4.48009e-65
CJ587937 rwhsc16b14 2003 3' Shoot grown with cold treatment 616bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 638 5.71839e-65
CJ588197 rwhsc17a05 2003 3' Shoot grown with cold treatment 579bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 670 9.56651e-69
CJ588923 rwhsc19j23 2003 3' Shoot grown with cold treatment 558bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 645 6.91179e-66
CJ589114 rwhsc1e20 2003 3' Shoot grown with cold treatment 578bp Wh_SHC_all.Contig2493 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 638 4.91321e-65
CJ699729 whsd18d02 2003 5' Shoot grown with dessication 784bp Wh_SHDr_all.Contig738 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1116 3.53462e-120
CJ593828 rwhsd18d02 2003 3' Shoot grown with dessication 674bp Wh_SHDr_all.Contig738 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 745 2.74295e-77
CJ710654 whv3n5a21 2003 5' Shoot grown under cold condition for 3days 788bp Wh_V483_all.Contig1649 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1102 1.50824e-118
CJ711295 whv3n7p13 2003 5' Shoot grown under cold condition for 3days 803bp Wh_V483_all.Contig1649 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1055 9.20465e-114
CJ605490 rwhv3n5a21 2003 3' Shoot grown under cold condition for 3days 638bp Wh_V483_all.Contig1649 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 659 2.2827e-67
CJ606199 rwhv3n7p13 2003 3' Shoot grown under cold condition for 3days 557bp Wh_V483_all.Contig1649 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 650 1.81889e-66
CJ603093 rwhv3n14n17 2003 3' Shoot grown under cold condition for 3days 406bp Wh_V483_all.Contig1649 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_000030 [Oryza sativa (japonica cultivar-group)] 250 2.91262e-20
CJ604611 rwhv3n20d03 2003 3' Shoot grown under cold condition for 3days 596bp Wh_V483_all.Contig1649 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 632 2.61396e-64
CJ729653 whvs5p19 2003 5' Liquid cultured tissue 791bp Wh_VSCB_all.Contig2369 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1168 3.378e-126
CJ625948 rwhvs5p19 2003 3' Liquid cultured tissue 705bp Wh_VSCB_all.Contig2369 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 709 4.57845e-73
CJ718439 whvd19m06 2003 5' Shoot grown with dessication 811bp Wh_VWD_all.Contig1196 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 1079 7.43716e-116
CJ616377 rwhvd7p10 2003 3' Shoot grown with dessication 635bp Wh_VWD_all.Contig1196 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 165 1.35315e-13
CJ613246 rwhvd16b13 2003 3' Shoot grown with dessication 505bp Wh_VWD_all.Contig1216 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       unknown [Zea mays] 547 1.20193e-54
CJ614287 rwhvd19m06 2003 3' Shoot grown with dessication 570bp Wh_VWD_all.Contig1216 MUGEST2003_all.Contig25141 MUGEST2003_all.Contig25141       hypothetical protein OsJ_010264 [Oryza sativa (japonica cultivar-group)] 659 1.7209e-67
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