Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 33
First Previous 1-33 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_19024_i08f 2012 5' Dormant seed with water absorption 172bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 109 3.50743e-22
whhg_7058_g16f 2012 5' Anther at meiosis of MT4B CS wheat 642bp Contig7857       serineincorporator3[OryzasativaIndicaGroup] 331 1.08576e-88
whhg_7058_g16r 2012 3' Anther at meiosis of MT4B CS wheat 722bp Contig7857       serineincorporator3[OryzasativaIndicaGroup] 346 5.57091e-93
whrd_20009_h01f 2012 5' Root of dessiccated seed 716bp Contig7857       uncharacterizedproteinLOC100191588precursor[Zeamays] 466 2.77323e-129
whrd_20009_h01r 2012 3' Root of dessiccated seed 610bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 294 1.3074e-77
whvs_4063_b14f 2012 5' Liquid cultured tissue 595bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 170 2.03185e-40
whvs_4063_b14r 2012 3' Liquid cultured tissue 574bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 187 1.45562e-45
whxb_12015_a01f 2012 5' Root 459bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 133 2.94715e-29
whxb_12015_a01r 2012 3' Root 433bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 164 1.20227e-38
whxd_19055_j13r 2012 3' Root, treated at 50 microM Al for 6h 506bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 200 2.00122e-49
whxh_30042_g11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 640bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 280 2.83375e-73
HX030182 whxl_1015_a01f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 435bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 170 2.18177e-40
HX030194 whxl_1015_a01r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 381bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 110 2.06959e-22
HX030220 whxl_1015_a02r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 83bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 57 1.59056e-06
HX049884 whxm_5065_p18f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 411bp Contig7857       serineincorporator3[OryzasativaIndicaGroup] 254 1.15023e-65
HX049900 whxm_5065_p18r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 313bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 60 2.41793e-07
HX092243 whxp_21043_f10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 572bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 243 2.19677e-62
HX092267 whxp_21043_f10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 524bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 212 4.13032e-53
HX127791 whxr_10077_c17f 2012 5' Roots, 18 day old plants were grown hydroponically 817bp Contig7857       hypotheticalproteinOsJ_08689[OryzasativaJaponicaGroup] 472 8.64985e-131
HX138884 whxr_21085_l22f 2012 5' Roots, 18 day old plants were grown hydroponically 750bp Contig7857       hypotheticalproteinOsJ_08689[OryzasativaJaponicaGroup] 477 2.27538e-132
HX138909 whxr_21085_l22r 2012 3' Roots, 18 day old plants were grown hydroponically 770bp Contig7857       serineincorporator3[OryzasativaIndicaGroup] 368 1.19501e-99
HX179732 whxt_24051_n13f 2012 5' Roots, 18 day old plants were grown hydroponically 278bp Contig7857       beta-galactosidase[BrevibacteriumlinensBL2] 35 6.39988
HX179760 whxt_24051_n13r 2012 3' Roots, 18 day old plants were grown hydroponically 286bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 79 3.03596e-13
HX192162 whxu_12090_h23f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 434bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 118 7.53349e-25
HX192183 whxu_12090_h23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 459bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 176 2.32436e-42
HX194784 whxu_14006_k04f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 495bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 154 1.24497e-35
HX194810 whxu_14006_k04r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 464bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 172 3.43195e-41
HX197295 whxu_28019_m06f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 814bp Contig7857       hypotheticalproteinOsJ_08689[OryzasativaJaponicaGroup] 474 1.72978e-131
HX197319 whxu_28019_m06r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 758bp Contig7857       serineincorporator3[OryzasativaIndicaGroup] 354 2.28401e-95
whxw_8023_i06f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 852bp Contig7857       hypotheticalproteinOsJ_08689[OryzasativaJaponicaGroup] 470 2.07618e-130
whxw_8023_i06r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 762bp Contig7857       serineincorporator3[OryzasativaIndicaGroup] 315 1.18598e-83
whyd_22011_d19f 2012 5' Spikelet at late flowering 263bp Contig7857       PREDICTED:probableserineincorporator-like[Brachypodiumdistachyon] 177 1.81031e-42
whyd_22010_d19r 2012 3' Spikelet at late flowering 256bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 56 2.75902e-06
page-top