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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 60
First Previous 1-60 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ636480 whdp6b09 2003 5' Seed DPA20 527bp Wh_DPA20_all.Contig589 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 417 1.61359e-39
CJ632601 whdp12b07 2003 5' Seed DPA20 702bp whdp12b07 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 1006 1.63398e-107
CJ528052 rwhdp6b09 2003 3' Seed DPA20 489bp Wh_DPA20_all.Contig589 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 444 9.35457e-43
CJ524062 rwhdp12b07 2003 3' Seed DPA20 722bp Wh_DPA20_all.Contig1565 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 557 1.99684e-55
CJ638531 whec13j05 2003 5' Dormant seed with cold treatment after water absorption 695bp whec13j05 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1009 7.19221e-108
CJ638983 whec15f05 2003 5' Dormant seed with cold treatment after water absorption 664bp Wh_EMC_all.Contig45 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 335 9.29734e-30
CJ530562 rwhec15f05 2003 3' Dormant seed with cold treatment after water absorption 648bp Wh_EMC_all.Contig45 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 358 1.91353e-32
CJ643224 whei12g22 2003 5' Dormant seed with water absorption after breaking 642bp Wh_EMI_all.Contig1500 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 552 5.97239e-55
CJ643744 whei14i19 2003 5' Dormant seed with water absorption after breaking 504bp whei14i19 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 414 3.10546e-39
CJ534899 rwhei12g22 2003 3' Dormant seed with water absorption after breaking 743bp Wh_EMI_all.Contig1500 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 586 9.2179e-59
CJ656187 whgc5h18 2003 5' Anther at meiosis of DT4B CS wheat 690bp Wh_GCPCDAM_all.Contig838 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 988 1.91984e-105
CJ656383 whgc6g05 2003 5' Anther at meiosis of DT4B CS wheat 737bp Wh_GCPCDAM_all.Contig1727 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 636 1.44294e-64
CJ548652 rwhgc6g05 2003 3' Anther at meiosis of DT4B CS wheat 317bp Wh_GCPCDAM_all.Contig1727 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       hypothetical protein OsJ_016877 [Oryza sativa (japonica cultivar-group)] 361 3.97638e-33
CJ547981 rwhgc3j04 2003 3' Anther at meiosis of DT4B CS wheat 788bp Wh_GCPCDAM_all.Contig1727 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 336 1.00287e-29
CJ661157 whhg7l10 2003 5' Anther at meiosis of MT4B CS wheat 778bp Wh_HGCPCDAM_all.Contig1898 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 809 1.39194e-84
CJ659424 whhg19h18 2003 5' Anther at meiosis of MT4B CS wheat 720bp Wh_HGCPCDAM_all.Contig1642 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 975 6.7061e-104
CJ659855 whhg20j24 2003 5' Anther at meiosis of MT4B CS wheat 709bp Wh_HGCPCDAM_all.Contig1642 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 971 1.89698e-103
CJ553629 rwhhg7l10 2003 3' Anther at meiosis of MT4B CS wheat 881bp Wh_HGCPCDAM_all.Contig1898 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 634 7.30691e-65
CJ551812 rwhhg19h18 2003 3' Anther at meiosis of MT4B CS wheat 852bp Wh_HGCPCDAM_all.Contig1898 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 770 5.44727e-80
CJ552268 rwhhg20j24 2003 3' Anther at meiosis of MT4B CS wheat 876bp Wh_HGCPCDAM_all.Contig1898 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 776 1.15612e-80
CJ666487 whkp7h23 2003 5' Shoot grown under continuous light 715bp whkp7h23 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1003 3.76396e-107
CJ559223 rwhkp7h23 2003 3' Shoot grown under continuous light 854bp Wh_KMP_all.Contig2346 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 794 9.03868e-83
CJ669911 whkv1i02 2003 5' Shoot grown with continuous light after cold treatment 111bp whkv1i02 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       predicted protein [Streptomyces sp. SPB74] 83 0.682767
CJ565583 rwhms10j11 2003 3' Seed DPA5 of DT3DL CS wheat 761bp rwhms10j11 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 296 3.819e-41
CJ678374 whok12g10 2003 5' Seed DPA5 563bp Wh_OKCS_all.Contig2219 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 256 8.95437e-21
CJ678735 whok13m04 2003 5' Seed DPA5 707bp Wh_OKCS_all.Contig2219 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 993 5.35841e-106
CJ679086 whok15b13 2003 5' Seed DPA5 831bp Wh_OKCS_all.Contig716 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os07g0474600 [Oryza sativa (japonica cultivar-group)] 911 2.3365e-96
CJ571522 rwhok12g10 2003 3' Seed DPA5 532bp Wh_OKCS_all.Contig2219 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 271 1.39344e-22
CJ572266 rwhok15b13 2003 3' Seed DPA5 900bp Wh_OKCS_all.Contig716 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 871 1.15852e-91
CJ683180 whpc11f20 2003 5' Anther at meiosis 816bp Wh_PCDAM_all.Contig1800 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1069 1.08949e-114
CJ686104 whpc4e22 2003 5' Anther at meiosis 709bp Wh_PCDAM_all.Contig1800 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1034 9.43657e-111
CJ687025 whpc8h18 2003 5' Anther at meiosis 822bp Wh_PCDAM_all.Contig1454 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 934 4.94832e-99
CJ684027 whpc15c03 2003 5' Anther at meiosis 353bp Wh_PCDAM_all.Contig1800 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 540 6.89801e-54
CJ684363 whpc16k24 2003 5' Anther at meiosis 714bp Wh_PCDAM_all.Contig1800 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1044 6.62862e-112
CJ685147 whpc19n20 2003 5' Anther at meiosis 798bp Wh_PCDAM_all.Contig1800 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1096 7.65803e-118
CJ580531 rwhpc8h18 2003 3' Anther at meiosis 862bp Wh_PCDAM_all.Contig1454 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 716 1.01493e-73
CJ577409 rwhpc15c03 2003 3' Anther at meiosis 374bp Wh_PCDAM_all.Contig1838 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 469 1.18722e-45
CJ577753 rwhpc16k24 2003 3' Anther at meiosis 857bp Wh_PCDAM_all.Contig1838 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 816 2.55815e-85
CJ578352 rwhpc19b14 2003 3' Anther at meiosis 864bp Wh_PCDAM_all.Contig1454 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 720 3.53387e-74
CJ690197 whrd1j24 2003 5' Root of dessiccated seed 689bp Wh_RDr_all.Contig1870 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1028 4.4157e-110
CJ688534 whrd14f08 2003 5' Root of dessiccated seed 724bp Wh_RDr_all.Contig1870 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1002 5.05371e-107
CJ689204 whrd17a23 2003 5' Root of dessiccated seed 689bp Wh_RDr_all.Contig1870 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 977 3.62066e-104
CJ583772 rwhrd1j24 2003 3' Root of dessiccated seed 704bp Wh_RDr_all.Contig1722 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 488 1.91857e-47
CJ582084 rwhrd14f08 2003 3' Root of dessiccated seed 719bp Wh_RDr_all.Contig1722 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 557 1.97852e-55
CJ582758 rwhrd17a23 2003 3' Root of dessiccated seed 692bp Wh_RDr_all.Contig1722 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 500 7.48969e-49
CJ584145 rwhrd20p01 2003 3' Root of dessiccated seed 672bp rwhrd20p01 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 330 3.6326e-29
CJ696614 whsc5h02 2003 5' Shoot grown with cold treatment 778bp whsc5h02 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 592 2.02399e-59
CJ692781 whsc10j23 2003 5' Shoot grown with cold treatment 302bp whsc10j23 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       hypothetical protein OsJ_023257 [Oryza sativa (japonica cultivar-group)] 410 8.13117e-39
CJ699517 whsd17f04 2003 5' Shoot grown with dessication 730bp Wh_SHDr_all.Contig1406 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1002 5.14559e-107
CJ699526 whsd17f15 2003 5' Shoot grown with dessication 464bp Wh_SHDr_all.Contig1406 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 597 1.66076e-60
CJ593602 rwhsd17f04 2003 3' Shoot grown with dessication 763bp Wh_SHDr_all.Contig1494 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 603 1.03579e-60
CJ593611 rwhsd17f15 2003 3' Shoot grown with dessication 680bp Wh_SHDr_all.Contig1494 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 448 7.6998e-43
CJ707356 whv3n10e13 2003 5' Shoot grown under cold condition for 3days 748bp Wh_V483_all.Contig256 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1052 8.63512e-113
CJ708201 whv3n13n13 2003 5' Shoot grown under cold condition for 3days 659bp Wh_V483_all.Contig256 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 878 9.97957e-93
CJ601999 rwhv3n10e13 2003 3' Shoot grown under cold condition for 3days 809bp Wh_V483_all.Contig990 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 545 6.15301e-54
CJ602879 rwhv3n13n13 2003 3' Shoot grown under cold condition for 3days 805bp Wh_V483_all.Contig990 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 669 1.82416e-70
CJ711844 whva10i10 2003 5' Shoot with ABA treatment 613bp whva10i10 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 840 2.15792e-88
CJ722081 whvh15b18 2003 5' Shoot with heat shock treatment 798bp Wh_VHS_all.Contig53 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       Os04g0402100 [Oryza sativa (japonica cultivar-group)] 1112 1.06859e-119
CJ725451 whvs10b20 2003 5' Liquid cultured tissue 731bp Wh_VSCB_all.Contig1000 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 1043 9.06179e-112
CJ621564 rwhvs10b20 2003 3' Liquid cultured tissue 747bp Wh_VSCB_all.Contig1000 MUGEST2003_all.Contig25091 MUGEST2003_all.Contig25091       unknown [Zea mays] 406 1.68674e-57
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