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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 49
First Previous 1-49 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ631591 whcs8f16 2003 5' Callus 740bp Wh_CSEC_all.Contig1423 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.40333e-75
CJ523026 rwhcs8f16 2003 3' Callus 682bp Wh_CSEC_all.Contig1423 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.1892e-75
CJ523270 rwhcs9e16 2003 3' Callus 243bp Wh_CSEC_all.Contig1423 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os08g0207000 [Oryza sativa (japonica cultivar-group)] 146 3.30863e-08
CJ646609 whei5i04 2003 5' Dormant seed with water absorption after breaking 654bp Wh_EMI_all.Contig1698 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.09618e-75
CJ643487 whei13i13 2003 5' Dormant seed with water absorption after breaking 636bp Wh_EMI_all.Contig1698 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.00997e-75
CJ538328 rwhei5i04 2003 3' Dormant seed with water absorption after breaking 713bp Wh_EMI_all.Contig1698 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.29351e-75
CJ535166 rwhei13i13 2003 3' Dormant seed with water absorption after breaking 681bp Wh_EMI_all.Contig1698 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.17694e-75
CJ651357 whem4i04 2003 5' Dormant seed with water absorption 697bp Wh_EM_all.Contig1249 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.23824e-75
CJ543281 rwhem4i04 2003 3' Dormant seed with water absorption 664bp Wh_EM_all.Contig1249 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.12082e-75
CJ656244 whgc5m05 2003 5' Anther at meiosis of DT4B CS wheat 638bp Wh_GCPCDAM_all.Contig2025 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 725 5.07354e-75
CJ656276 whgc5o09 2003 5' Anther at meiosis of DT4B CS wheat 713bp Wh_GCPCDAM_all.Contig2025 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.29351e-75
CJ548510 rwhgc5m05 2003 3' Anther at meiosis of DT4B CS wheat 640bp Wh_GCPCDAM_all.Contig2025 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.0346e-75
CJ548545 rwhgc5o09 2003 3' Anther at meiosis of DT4B CS wheat 647bp Wh_GCPCDAM_all.Contig2025 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.05923e-75
CJ660794 whhg6b21 2003 5' Anther at meiosis of MT4B CS wheat 370bp Wh_HGCPCDAM_all.Contig2171 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958            
CJ661068 whhg7f21 2003 5' Anther at meiosis of MT4B CS wheat 739bp Wh_HGCPCDAM_all.Contig2171 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.40333e-75
CJ657678 whhg11o12 2003 5' Anther at meiosis of MT4B CS wheat 477bp Wh_HGCPCDAM_all.Contig2171 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os04g0502300 [Oryza sativa (japonica cultivar-group)] 436 7.85538e-42
CJ553249 rwhhg6b21 2003 3' Anther at meiosis of MT4B CS wheat 349bp Wh_HGCPCDAM_all.Contig2171 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       40S ribosomal protein S11 [Elaeis guineensis] 73 9.82032
CJ553538 rwhhg7f21 2003 3' Anther at meiosis of MT4B CS wheat 715bp Wh_HGCPCDAM_all.Contig2171 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.29351e-75
CJ549985 rwhhg11o12 2003 3' Anther at meiosis of MT4B CS wheat 436bp Wh_HGCPCDAM_all.Contig2171 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os04g0502300 [Oryza sativa (japonica cultivar-group)] 454 6.38481e-44
CJ672483 whms10b10 2003 5' Seed DPA5 of DT3DL CS wheat 697bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.2505e-75
CJ673538 whms13p19 2003 5' Seed DPA5 of DT3DL CS wheat 712bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.29351e-75
CJ673681 whms14i15 2003 5' Seed DPA5 of DT3DL CS wheat 561bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       unknown [Zea mays] 556 1.46234e-55
CJ674030 whms15n24 2003 5' Seed DPA5 of DT3DL CS wheat 159bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958            
CJ675113 whms19n23 2003 5' Seed DPA5 of DT3DL CS wheat 769bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.50611e-75
CJ565447 rwhms10b10 2003 3' Seed DPA5 of DT3DL CS wheat 659bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.1085e-75
CJ566550 rwhms13p19 2003 3' Seed DPA5 of DT3DL CS wheat 689bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.21372e-75
CJ566689 rwhms14i15 2003 3' Seed DPA5 of DT3DL CS wheat 508bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       40S ribosomal protein S11 606 1.72375e-61
CJ567054 rwhms15n24 2003 3' Seed DPA5 of DT3DL CS wheat 166bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       40S ribosomal protein S11 194 9.05373e-14
CJ568161 rwhms19n23 2003 3' Seed DPA5 of DT3DL CS wheat 724bp Wh_MS_all.Contig2671 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.34232e-75
CJ679587 whok17b14 2003 5' Seed DPA5 718bp Wh_OKCS_all.Contig1821 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.31791e-75
CJ680267 whok19m12 2003 5' Seed DPA5 736bp Wh_OKCS_all.Contig1821 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       40S ribosomal protein S11 733 8.15558e-76
CJ572776 rwhok17b14 2003 3' Seed DPA5 726bp Wh_OKCS_all.Contig1821 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.35452e-75
CJ573473 rwhok19m12 2003 3' Seed DPA5 721bp Wh_OKCS_all.Contig1821 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       40S ribosomal protein S11 733 7.79788e-76
CJ686212 whpc4p02 2003 5' Anther at meiosis 787bp Wh_PCDAM_all.Contig367 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.57898e-75
CJ579686 rwhpc4p02 2003 3' Anther at meiosis 765bp Wh_PCDAM_all.Contig367 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.48182e-75
CJ688347 whrd13k08 2003 5' Root of dessiccated seed 712bp Wh_RDr_all.Contig1977 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.29351e-75
CJ688731 whrd15c23 2003 5' Root of dessiccated seed 743bp Wh_RDr_all.Contig1977 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.41554e-75
CJ581897 rwhrd13k08 2003 3' Root of dessiccated seed 694bp Wh_RDr_all.Contig1977 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.23824e-75
CJ582262 rwhrd15c23 2003 3' Root of dessiccated seed 679bp Wh_RDr_all.Contig1977 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.16468e-75
CJ695390 whsc1m20 2003 5' Shoot grown with cold treatment 751bp Wh_SHC_all.Contig1457 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.45215e-75
CJ588304 rwhsc17f24 2003 3' Shoot grown with cold treatment 718bp Wh_SHC_all.Contig1457 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.30571e-75
CJ589240 rwhsc1m20 2003 3' Shoot grown with cold treatment 694bp Wh_SHC_all.Contig1457 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 706 9.81115e-73
CJ708423 whv3n14o09 2003 5' Shoot grown under cold condition for 3days 798bp Wh_V483_all.Contig1166 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.62757e-75
CJ603108 rwhv3n14o09 2003 3' Shoot grown under cold condition for 3days 737bp Wh_V483_all.Contig1166 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.39113e-75
CJ725207 whvh8p19 2003 5' Shoot with heat shock treatment 813bp Wh_VHS_all.Contig94 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.67615e-75
CJ621307 rwhvh8p19 2003 3' Shoot with heat shock treatment 736bp Wh_VHS_all.Contig94 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 711 2.90069e-73
CJ727925 whvs19g02 2003 5' Liquid cultured tissue 338bp Wh_VSCB_all.Contig1775 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       ribosomal protein S11 209 1.63529e-15
CJ624135 rwhvs19g02 2003 3' Liquid cultured tissue 298bp Wh_VSCB_all.Contig1775 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       unknown [Picea sitchensis] 212 7.43246e-16
CJ624693 rwhvs20g02 2003 3' Liquid cultured tissue 204bp Wh_VSCB_all.Contig1775 MUGEST2003_all.Contig24958 MUGEST2003_all.Contig24958       unknown [Picea sitchensis] 206 3.67986e-15
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