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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 51
First Previous 1-51 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_1078_l05f 2012 5' Crown of seedling 463bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 255 3.91999e-66
whdl_1078_l05r 2012 3' Crown of seedling 43bp Contig7751            
whdl_15046_l21r 2012 3' Crown of seedling 126bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 83 2.07322e-14
whdl_1072_n05f 2012 5' Crown of seedling 582bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 307 1.70301e-81
whf_20035_e21r 2012 3' Spike at flowering date 298bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 81 1.34812e-13
whkp_5018_p08f 2012 5' Shoot grown under continuous light 716bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 449 3.50815e-124
whkp_5018_p08r 2012 3' Shoot grown under continuous light 702bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 331 1.02887e-88
whsc_20067_m17f 2012 5' Shoot grown with cold treatment 572bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 359 2.74688e-97
whsh_5002_b01r 2012 3' - 216bp Contig7751            
whsp_18015_a02f 2012 5' 81bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 56 3.5538e-06
whv_167095_a22f 2012 5' Shoot grown under cold condition for 16days 644bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 409 4.14981e-112
whv_167095_a22r 2012 3' Shoot grown under cold condition for 16days 714bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 343 2.68428e-92
whv_166056_j15f 2012 5' Shoot grown under cold condition for 16days 706bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 395 9.99834e-108
whv_166056_j15r 2012 3' Shoot grown under cold condition for 16days 732bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 333 3.88187e-89
whv3_9064_b16f 2012 5' Shoot grown under cold condition for 3days 646bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 252 6.57413e-65
whv3_9064_b16r 2012 3' Shoot grown under cold condition for 3days 619bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 265 8.86332e-69
whv3_15055_j13f 2012 5' Shoot grown under cold condition for 3days 667bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 381 7.81341e-104
whv3_15055_j13r 2012 3' Shoot grown under cold condition for 3days 643bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 281 9.99244e-74
whvh_2032_a07f 2012 5' Shoot with heat shock treatment 683bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 429 4.44225e-118
whvh_2032_a07r 2012 3' Shoot with heat shock treatment 668bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 327 2.28392e-87
whvh_5096_a24f 2012 5' Shoot with heat shock treatment 689bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 433 3.14397e-119
whvh_5096_a24r 2012 3' Shoot with heat shock treatment 667bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 329 4.60195e-88
whvh_10062_c16f 2012 5' Shoot with heat shock treatment 731bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 455 8.76333e-126
whvh_5062_c16f 2012 5' Shoot with heat shock treatment 666bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 419 3.34249e-115
whvh_10062_c16r 2012 3' Shoot with heat shock treatment 648bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 287 1.86715e-75
whvh_10014_d03f 2012 5' Shoot with heat shock treatment 651bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 406 2.75792e-111
whvh_19090_h24f 2012 5' Shoot with heat shock treatment 724bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 450 1.62151e-124
whvh_19090_h24r 2012 3' Shoot with heat shock treatment 688bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 329 4.89566e-88
whvh_9023_i06f 2012 5' Shoot with heat shock treatment 664bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 347 2.08371e-93
whvh_9023_i06r 2012 3' Shoot with heat shock treatment 689bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 320 2.27412e-85
whvh_3007_j01f 2012 5' Shoot with heat shock treatment 669bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 406 2.96222e-111
whvh_3007_j01r 2012 3' Shoot with heat shock treatment 651bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 289 4.91357e-76
whvh_10037_l09f 2012 5' Shoot with heat shock treatment 720bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 404 1.72375e-110
whvh_10037_l09r 2012 3' Shoot with heat shock treatment 617bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 285 8.16164e-75
whvh_9069_l18f 2012 5' Shoot with heat shock treatment 536bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 280 1.76298e-73
whvh_9069_l18r 2012 3' Shoot with heat shock treatment 584bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 276 4.27447e-72
whvh_10004_n03f 2012 5' Shoot with heat shock treatment 146bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 94 1.56381e-17
whvh_10004_n03r 2012 3' Shoot with heat shock treatment 177bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 121 1.15377e-25
whvh_16019_n05f 2012 5' Shoot with heat shock treatment 669bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 420 2.58902e-115
whvh_16019_n05r 2012 3' Shoot with heat shock treatment 697bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 334 1.20284e-89
whxh_9005_k02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 485bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 310 1.37615e-82
whxh_9005_k02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 631bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 287 1.73716e-75
HX106704 whxp_21081_p21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 586bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 256 2.72757e-66
HX110089 whxq_7093_c21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 389bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 84 9.20019e-15
HX110090 whxq_8093_c21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 389bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 84 9.20019e-15
HX110113 whxq_7093_c21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 380bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 123 2.36243e-26
HX110114 whxq_8093_c21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 379bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 123 2.36243e-26
HX114044 whxq_7042_g11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 617bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 344 8.67961e-93
HX114064 whxq_7042_g11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 627bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 313 2.23337e-83
whxy_1046_c11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 726bp Contig7751       PREDICTED:ruBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic-like[Brachypodiumdistachyon] 406 4.62428e-111
whxy_1046_c11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 755bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 350 2.50331e-94
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