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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 21
First Previous 1-21 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ695814 whsc2g17 2003 5' Shoot grown with cold treatment 697bp whsc2g17 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 619 1.21402e-62
CJ589706 rwhsc2g17 2003 3' Shoot grown with cold treatment 760bp rwhsc2g17 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 686 2.43948e-70
CJ699198 whsd16b10 2003 5' Shoot grown with dessication 703bp Wh_SHDr_all.Contig464 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 1043 8.37245e-112
CJ700433 whsd20a08 2003 5' Shoot grown with dessication 713bp Wh_SHDr_all.Contig1663 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 617 1.01074e-74
CJ593264 rwhsd16b10 2003 3' Shoot grown with dessication 707bp Wh_SHDr_all.Contig464 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 844 1.01525e-88
CJ594528 rwhsd20a08 2003 3' Shoot grown with dessication 760bp Wh_SHDr_all.Contig1663 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 914 8.96934e-97
CJ710024 whv3n2a19 2003 5' Shoot grown under cold condition for 3days 726bp Wh_V483_all.Contig1505 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 803 6.01145e-84
CJ707510 whv3n10o17 2003 5' Shoot grown under cold condition for 3days 767bp Wh_V483_all.Contig1505 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 727 4.34676e-75
CJ604827 rwhv3n2a19 2003 3' Shoot grown under cold condition for 3days 746bp Wh_V483_all.Contig916 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 842 1.92072e-88
CJ602165 rwhv3n10o17 2003 3' Shoot grown under cold condition for 3days 732bp Wh_V483_all.Contig916 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 860 1.5041e-90
CJ712330 whva12n21 2003 5' Shoot with ABA treatment 545bp Wh_VABA_all.Contig916 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 425 2.08718e-40
CJ712671 whva15d10 2003 5' Shoot with ABA treatment 765bp Wh_VABA_all.Contig1265 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 883 3.51064e-93
CJ607979 rwhva15d10 2003 3' Shoot with ABA treatment 836bp Wh_VABA_all.Contig916 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative reverse transcriptase [Sorghum bicolor] 191 7.25007e-13
CJ721194 whvh11c02 2003 5' Shoot with heat shock treatment 799bp Wh_VHS_all.Contig1174 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 818 1.32835e-85
CJ722488 whvh16o07 2003 5' Shoot with heat shock treatment 775bp Wh_VHS_all.Contig1174 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 903 1.73886e-95
CJ618532 rwhvh16o07 2003 3' Shoot with heat shock treatment 827bp Wh_VHS_all.Contig1174 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 987 3.5464e-105
CJ716980 whvd14f09 2003 5' Shoot grown with dessication 789bp Wh_VWD_all.Contig1389 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 819 9.86721e-86
CJ717737 whvd17c10 2003 5' Shoot grown with dessication 695bp Wh_VWD_all.Contig1389 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 291 1.29933e-24
CJ718839 whvd20i02 2003 5' Shoot grown with dessication 735bp Wh_VWD_all.Contig1601 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative SHOOT1 protein [Oryza sativa Japonica Group] 848 3.7378e-89
CJ612734 rwhvd14f09 2003 3' Shoot grown with dessication 604bp Wh_VWD_all.Contig1389 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904       putative tyrosine phosphatase [Oryza sativa] 494 2.70114e-48
CJ613550 rwhvd17c10 2003 3' Shoot grown with dessication 438bp Wh_VWD_all.Contig1389 MUGEST2003_all.Contig23904 MUGEST2003_all.Contig23904            
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