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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 443
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_20022_j20f 2012 5' Crown of seedling 475bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 227 1.50637e-57
whdl_20022_j20r 2012 3' Crown of seedling 164bp Contig7689       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 114 1.43307e-23
whe_18030_l14r 2012 3' Seed DPA10 367bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 177 1.76842e-42
whhg_16062_d16r 2012 3' Anther at meiosis of MT4B CS wheat 582bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 315 4.78819e-84
whkp_19008_i04f 2012 5' Shoot grown under continuous light 521bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 261 5.79851e-68
whkp_19008_i04r 2012 3' Shoot grown under continuous light 518bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 284 8.39307e-75
whkp_17068_m20r 2012 3' Shoot grown under continuous light 322bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 142 3.7816e-32
whkv_5028_f08r 2012 3' Shoot grown with continuous light after cold treatment 553bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 292 3.77995e-77
whsh_2049_a22r 2012 3' - 139bp Contig7689       PREDICTED:LOWQUALITYPROTEIN:meiosisinhibitorprotein1[Bostaurus] 37 1.6779
whsh_1010_d13f 2012 5' - 401bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 169 2.88828e-40
whsh_1010_d13r 2012 3' - 378bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 177 1.80048e-42
whsh_16026_d20f 2012 5' - 325bp Contig7689       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 117 1.69507e-24
whsh_16026_d20r 2012 3' - 322bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 137 1.59473e-30
whsh_1067_e11f 2012 5' - 147bp Contig7689       hypotheticalproteinEAI_08740[Harpegnathossaltator] 36 3.86972
whsh_1067_e11r 2012 3' - 179bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 46 0.00276534
whsh_1004_f13r 2012 3' - 203bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 61 1.43633e-07
whsh_5006_j13r 2012 3' - 115bp Contig7689       chlorophylla-bbindingprotein2[Zeamays] 53 3.02813e-05
whsh_4054_j22f 2012 5' - 179bp Contig7689       PREDICTED:LOWQUALITYPROTEIN:meiosisinhibitorprotein1[Bostaurus] 39 0.338039
whsh_4054_j22r 2012 3' - 130bp Contig7689       PREDICTED:LOWQUALITYPROTEIN:meiosisinhibitorprotein1[Bostaurus] 39 0.342274
whsh_9030_l08r 2012 3' - 305bp Contig7689       chlorophylla/b-bindingproteinCab-3C[Solanumlycopersicum] 124 1.05167e-26
whsh_9030_l08f 2012 5' - 365bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 141 6.32917e-32
whsh_8087_m12f 2012 5' - 170bp Contig7689       PREDICTED:LOWQUALITYPROTEIN:meiosisinhibitorprotein1[Bostaurus] 37 1.69386
whsh_8087_m12r 2012 3' - 120bp Contig7689       PREDICTED:LOWQUALITYPROTEIN:meiosisinhibitorprotein1[Bostaurus] 37 1.71428
whv_166023_i05f 2012 5' Shoot grown under cold condition for 16days 414bp Contig7689       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 284 7.88142e-75
whv_166023_i05r 2012 3' Shoot grown under cold condition for 16days 320bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 216 2.06834e-54
whv_1618006_k04f 2012 5' Shoot grown under cold condition for 16days 538bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 342 3.77772e-92
whv_1618006_k04r 2012 3' Shoot grown under cold condition for 16days 483bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 248 4.7912e-64
whv3_15064_b16r 2012 3' Shoot grown under cold condition for 3days 139bp Contig7689       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 96 2.33048e-18
whv3_13014_c03f 2012 5' Shoot grown under cold condition for 3days 614bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 386 2.56463e-105
whv3_13014_c03r 2012 3' Shoot grown under cold condition for 3days 461bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 235 5.48259e-60
whv3_16005_l01r 2012 3' Shoot grown under cold condition for 3days 531bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 304 1.09157e-80
whvd_8078_d19f 2012 5' Shoot grown with dessication 634bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 398 7.04693e-109
whvd_3011_e02f 2012 5' Shoot grown with dessication 524bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 197 1.05278e-48
whvd_3011_e02r 2012 3' Shoot grown with dessication 393bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 167 1.40386e-39
whvd_10057_h13r 2012 3' Shoot grown with dessication 61bp Contig7689            
whvd_15007_i01f 2012 5' Shoot grown with dessication 686bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 363 3.95266e-98
whvd_15007_i01r 2012 3' Shoot grown with dessication 533bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 222 1.82779e-59
whvd_13005_k01r 2012 3' Shoot grown with dessication 198bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 42 0.0407442
whvd_13002_o03f 2012 5' Shoot grown with dessication 419bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 252 2.61386e-65
whvh_4023_i06f 2012 5' Shoot with heat shock treatment 594bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 193 2.92719e-47
whvh_10082_p23f 2012 5' Shoot with heat shock treatment 675bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 403 2.55297e-110
whvh_10082_p23r 2012 3' Shoot with heat shock treatment 457bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 253 1.49616e-65
whxe_15048_a12f 2012 5' Seedling, infected with leaf rust 439bp Contig7689       RecName:Full=Chlorophylla-bbindingprotein25,chloroplastic;AltName:Full=LHCIItypeICAB-25;Short=LHCP;Flags:Precursor 170 1.26818e-40
whxe_16048_a12f 2012 5' Seedling, infected with leaf rust 434bp Contig7689       RecName:Full=Chlorophylla-bbindingprotein25,chloroplastic;AltName:Full=LHCIItypeICAB-25;Short=LHCP;Flags:Precursor 170 1.27907e-40
whxe_11029_c06f 2012 5' Seedling, infected with leaf rust 322bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 106 3.93708e-21
whxe_11029_c06r 2012 3' Seedling, infected with leaf rust 303bp Contig7689       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 124 1.37856e-26
whxe_35077_c17f 2012 5' Seedling, infected with leaf rust 599bp Contig7689       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 409 2.62689e-112
whxe_35077_c17r 2012 3' Seedling, infected with leaf rust 603bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 337 1.28814e-90
whxe_38029_d06f 2012 5' Seedling, infected with leaf rust 389bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 230 1.35579e-58
whxe_38029_d06r 2012 3' Seedling, infected with leaf rust 488bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 251 7.55194e-65
whxe_20030_d08f 2012 5' Seedling, infected with leaf rust 261bp Contig7689       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 186 2.99441e-45
whxe_20030_d08r 2012 3' Seedling, infected with leaf rust 557bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 308 6.78479e-82
whxe_35012_e03f 2012 5' Seedling, infected with leaf rust 633bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 404 9.7038e-111
whxe_35012_e03r 2012 3' Seedling, infected with leaf rust 603bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 338 5.78219e-91
whxe_20012_e04r 2012 3' Seedling, infected with leaf rust 495bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 263 1.90298e-68
whxe_14011_f01f 2012 5' Seedling, infected with leaf rust 512bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 323 1.55279e-86
whxe_14011_f01r 2012 3' Seedling, infected with leaf rust 564bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 311 6.36816e-83
whxe_36059_f14f 2012 5' Seedling, infected with leaf rust 511bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 321 5.90059e-86
whxe_3026_h08f 2012 5' Seedling, infected with leaf rust 605bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 384 1.21826e-104
whxe_3026_h08r 2012 3' Seedling, infected with leaf rust 611bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 360 1.48549e-97
whxe_24008_i03f 2012 5' Seedling, infected with leaf rust 556bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 292 3.85264e-77
whxe_24008_i03r 2012 3' Seedling, infected with leaf rust 530bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 286 3.07618e-75
whxe_5008_j03r 2012 3' Seedling, infected with leaf rust 472bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 253 1.50962e-65
whxe_20024_j07r 2012 3' Seedling, infected with leaf rust 183bp Contig7689       lightharvestingchlorophylla/b-bindingproteinLhcb1,partial[Loliumperenne] 126 2.73733e-27
whxe_28086_l23f 2012 5' Seedling, infected with leaf rust 316bp Contig7689       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 113 1.83597e-23
whxe_22004_m04f 2012 5' Seedling, infected with leaf rust 548bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 354 5.96319e-96
whxe_22004_m04r 2012 3' Seedling, infected with leaf rust 555bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 301 8.13735e-80
whxe_3004_n03r 2012 3' Seedling, infected with leaf rust 96bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.73893
whxe_3020_n08f 2012 5' Seedling, infected with leaf rust 649bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 416 2.66508e-114
whxe_3020_n08r 2012 3' Seedling, infected with leaf rust 594bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 337 1.25508e-90
whxe_11001_o01f 2012 5' Seedling, infected with leaf rust 353bp Contig7689       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 123 3.09019e-26
whxe_12001_o01f 2012 5' Seedling, infected with leaf rust 334bp Contig7689       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 112 5.39157e-23
whxe_11001_o01r 2012 3' Seedling, infected with leaf rust 336bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 148 8.83283e-34
whxe_12001_o01r 2012 3' Seedling, infected with leaf rust 336bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 148 8.83283e-34
whxe_7017_p06r 2012 3' Seedling, infected with leaf rust 200bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 51 0.000114182
whxe_22018_p07r 2012 3' Seedling, infected with leaf rust 186bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 59 5.54788e-07
whxf_14047_a09f 2012 5' Seedling, infected with leaf rust 51bp Contig7689       unknown[Lotusjaponicus] 43 0.0212322
whxf_14046_d12r 2012 3' Seedling, infected with leaf rust 609bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 356 2.14504e-96
whxf_17046_d12r 2012 3' Seedling, infected with leaf rust 205bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 81 7.86317e-14
whxf_17094_d23f 2012 5' Seedling, infected with leaf rust 40bp Contig7689            
whxf_9012_e03f 2012 5' Seedling, infected with leaf rust 604bp Contig7689       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 381 6.04618e-104
whxf_9012_e03r 2012 3' Seedling, infected with leaf rust 452bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 236 1.90926e-60
whxf_15091_e21r 2012 3' Seedling, infected with leaf rust 53bp Contig7689       chloroplastchlorophyllA/Bbindingprotein[Heveabrasiliensis] 36 1.98727
whxf_9009_g02f 2012 5' Seedling, infected with leaf rust 41bp Contig7689            
whxf_33042_g11f 2012 5' Seedling, infected with leaf rust 607bp Contig7689       lightharvestingchlorophylla/b-bindingproteinLhcb1[Hordeumvulgaresubsp.vulgare] 420 1.19205e-115
whxf_27074_g19f 2012 5' Seedling, infected with leaf rust 165bp Contig7689       PREDICTED:LOWQUALITYPROTEIN:meiosisinhibitorprotein1[Bostaurus] 37 1.70466
whxf_27074_g19r 2012 3' Seedling, infected with leaf rust 151bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.84567
whxf_14042_h11f 2012 5' Seedling, infected with leaf rust 584bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 308 5.95072e-82
whxf_14042_h11r 2012 3' Seedling, infected with leaf rust 520bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 290 1.52239e-76
whxf_15042_h11r 2012 3' Seedling, infected with leaf rust 603bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 337 1.28814e-90
whxf_17055_i14r 2012 3' Seedling, infected with leaf rust 568bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 305 6.06878e-81
whxf_22071_i17r 2012 3' Seedling, infected with leaf rust 446bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 235 5.60343e-60
whxf_12024_j08f 2012 5' Seedling, infected with leaf rust 649bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 409 3.25784e-112
whxf_12024_j08r 2012 3' Seedling, infected with leaf rust 594bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 341 8.69173e-92
whxf_15084_m24r 2012 3' Seedling, infected with leaf rust 469bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 246 1.85363e-63
whxg_2015_a01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 262bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 71 8.20186e-11
whxg_3015_a01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 266bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 71 8.17317e-11
whxg_2015_a01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 234bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 71 8.15036e-11
whxg_3015_a01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 240bp Contig7689       chlorophylla/bbindingprotein,partial[Loliumperenne] 71 8.09488e-11
whxg_15064_b16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 598bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 409 2.62689e-112
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