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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 12
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ533444 rwhec6f19 2003 3' Dormant seed with cold treatment after water absorption 727bp rwhec6f19 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsJ_025397 [Oryza sativa (japonica cultivar-group)] 429 1.41478e-40
CJ573115 rwhok18g15 2003 3' Seed DPA5 814bp rwhok18g15 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsI_027268 [Oryza sativa (indica cultivar-group)] 395 3.60933e-40
CJ682884 whpc10a05 2003 5' Anther at meiosis 258bp Wh_PCDAM_all.Contig1803 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       Membrane-fusion protein , contains peptidase family M50 domain [Methylokorus infernorum V4] 74 7.53859
CJ687149 whpc9a17 2003 5' Anther at meiosis 855bp Wh_PCDAM_all.Contig1803 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsJ_025397 [Oryza sativa (japonica cultivar-group)] 480 2.32534e-46
CJ576201 rwhpc10a05 2003 3' Anther at meiosis 297bp Wh_PCDAM_all.Contig1803 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsJ_025397 [Oryza sativa (japonica cultivar-group)] 380 2.45708e-35
CJ576562 rwhpc11i18 2003 3' Anther at meiosis 289bp Wh_PCDAM_all.Contig1803 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       unknown [Zea mays] 420 5.71247e-40
CJ580665 rwhpc9a17 2003 3' Anther at meiosis 853bp Wh_PCDAM_all.Contig1803 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsJ_025397 [Oryza sativa (japonica cultivar-group)] 521 4.0951e-51
CJ584849 rwhrd4k02 2003 3' Root of dessiccated seed 754bp rwhrd4k02 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsI_027268 [Oryza sativa (indica cultivar-group)] 693 3.73247e-71
CJ710347 whv3n3i23 2003 5' Shoot grown under cold condition for 3days 818bp Wh_V483_all.Contig889 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsI_027268 [Oryza sativa (indica cultivar-group)] 704 2.29822e-72
CJ605169 rwhv3n3i23 2003 3' Shoot grown under cold condition for 3days 898bp Wh_V483_all.Contig889 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsJ_025397 [Oryza sativa (japonica cultivar-group)] 570 9.20891e-57
CJ610332 rwhva4k12 2003 3' Shoot with ABA treatment 683bp Wh_VABA_all.Contig804 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsI_027268 [Oryza sativa (indica cultivar-group)] 139 8.68953e-10
CJ611048 rwhva7l18 2003 3' Shoot with ABA treatment 782bp Wh_VABA_all.Contig804 MUGEST2003_all.Contig22444 MUGEST2003_all.Contig22444       hypothetical protein OsJ_025397 [Oryza sativa (japonica cultivar-group)] 362 9.542e-33
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