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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 53
First Previous 1-53 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_18084_f06r 2012 3' Crown of seedling 485bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 9.61896e-52
whem_2055_i14f 2012 5' Dormant seed with water absorption 384bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.93544e-69
whh_9005_f19r 2012 3' Spike at heading date 287bp Contig7460            
whh_20021_f20f 2012 5' Spike at heading date 275bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.94221e-45
whh_20021_f20r 2012 3' Spike at heading date 197bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 4.19685e-15
whh_18070_i17r 2012 3' Spike at heading date 403bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 9.31794e-15
whh_21071_m23r 2012 3' Spike at heading date 510bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 2.0613e-46
whkp_18015_a02f 2012 5' Shoot grown under continuous light 754bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 490 2.64372e-136
whkp_18015_a02r 2012 3' Shoot grown under continuous light 687bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 285 8.01995e-75
whms_9093_d22f 2012 5' Seed DPA5 of DT3DL CS wheat 633bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 5.94196e-76
whms_9093_d22r 2012 3' Seed DPA5 of DT3DL CS wheat 550bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 8.2973e-61
whms_18092_e24r 2012 3' Seed DPA5 of DT3DL CS wheat 670bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 317 1.80096e-84
whoh_8094_l24r 2012 3' Pistil at heading date 197bp Contig7460            
whok_1069_k18f 2012 5' Seed DPA5 326bp Contig7460       hypotheticalproteinHMPREF1032_02893[Subdoligranulumsp.4_3_54A2FAA] 35 8.47131
whok_1069_k18r 2012 3' Seed DPA5 288bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0699014
whok_1021_l05f 2012 5' Seed DPA5 66bp Contig7460            
whok_1021_l05r 2012 3' Seed DPA5 133bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0685439
whpc_10028_f07f 2012 5' Anther at meiosis 441bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.68643e-78
whsc_5077_d18f 2012 5' Shoot grown with cold treatment 529bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 147 1.3075e-33
whsc_5077_d18r 2012 3' Shoot grown with cold treatment 502bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 159 3.83458e-37
whsd_14040_i11f 2012 5' Shoot grown with dessication 578bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.10671e-108
whsd_14040_i11r 2012 3' Shoot grown with dessication 579bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 236 2.77959e-60
whsp_5059_f14r 2012 3' 599bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 5.36718e-65
whsp_5026_h07f 2012 5' 640bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 7.66353e-95
whsp_5026_h07r 2012 3' 567bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 2.84533e-46
whsp_20004_n03r 2012 3' 603bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 8.68051e-71
whvd_4088_j24f 2012 5' Shoot grown with dessication 193bp Contig7460            
whvd_4088_j24r 2012 3' Shoot grown with dessication 184bp Contig7460            
whvh_17037_l09f 2012 5' Shoot with heat shock treatment 664bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 6.81345e-76
whvh_17037_l09r 2012 3' Shoot with heat shock treatment 633bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 3.59651e-81
whxa_1007_i02r 2012 3' Root 592bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.67826e-69
whxb_28027_f05r 2012 3' Root 524bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.08441e-61
whxb_5002_o04f 2012 5' Root 549bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 168 1.05449e-39
whxb_5002_o04r 2012 3' Root 266bp Contig7460            
whxc_6021_l05f 2012 5' Root, treated at 50 microM Al for 6h 573bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 2.4049e-40
whxc_6021_l05r 2012 3' Root, treated at 50 microM Al for 6h 535bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 9.43524e-43
whxd_29048_a11f 2012 5' Root, treated at 50 microM Al for 6h 356bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.42213e-47
whxd_29048_a11r 2012 3' Root, treated at 50 microM Al for 6h 340bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 2.4855e-20
whxd_30048_a11r 2012 3' Root, treated at 50 microM Al for 6h 430bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.86985e-48
whxd_5053_k14f 2012 5' Root, treated at 50 microM Al for 6h 237bp Contig7460            
whxd_35022_l07f 2012 5' Root, treated at 50 microM Al for 6h 566bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 159 5.37852e-37
whxd_35022_l07r 2012 3' Root, treated at 50 microM Al for 6h 534bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 3.07413e-38
whxd_40083_n21f 2012 5' Root, treated at 50 microM Al for 6h 531bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 8.1086e-31
whxd_40083_n21r 2012 3' Root, treated at 50 microM Al for 6h 503bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 2.47399e-36
HX001638 whxi_5077_c17f 2012 5' Two-week old seedlings(22℃ 16L-8D) 491bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 4.70872e-67
HX001653 whxi_5077_c17r 2012 3' Two-week old seedlings(22℃ 16L-8D) 376bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 1.00046e-24
HX092787 whxp_22076_f19r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 110bp Contig7460            
HX128754 whxr_16046_d12f 2012 5' Roots, 18 day old plants were grown hydroponically 781bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 9.68687e-105
HX128781 whxr_16046_d12r 2012 3' Roots, 18 day old plants were grown hydroponically 713bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.92369e-90
HX177127 whxt_14037_l09r 2012 3' Roots, 18 day old plants were grown hydroponically 370bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 3.43616e-41
HX187368 whxu_19093_d22f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 647bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 5.57825e-56
HX187395 whxu_19093_d22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 642bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 8.9441e-67
whyd_24063_o04r 2012 3' Spikelet at late flowering 398bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 3.11287e-26
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