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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 40
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_20062_c16f 2012 5' Callus 404bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 150 1.8059e-34
whcs_20062_c16r 2012 3' Callus 400bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 182 5.62377e-44
whcs_4088_j24f 2012 5' Callus 713bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 472 3.83141e-131
whcs_4088_j24r 2012 3' Callus 767bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 435 1.03081e-119
whdp_2019_m05f 2012 5' Seed DPA20 549bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 366 2.58664e-99
whdp_2019_m05r 2012 3' Seed DPA20 570bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 226 2.73017e-57
whe_12061_h16r 2012 3' Seed DPA10 369bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 184 8.73813e-45
whe_13063_l22f 2012 5' Seed DPA10 505bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 203 1.35124e-50
whe_13062_l22r 2012 3' Seed DPA10 116bp Contig7285            
whe_14062_l22r 2012 3' Seed DPA10 116bp Contig7285            
whei_10064_a16r 2012 3' Dormant seed with water absorption after breaking 651bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 372 4.41332e-101
whvd_15015_b01f 2012 5' Shoot grown with dessication 722bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 487 2.02209e-135
whvd_15015_b01r 2012 3' Shoot grown with dessication 681bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 231 1.34448e-58
whvh_9015_a02f 2012 5' Shoot with heat shock treatment 698bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 401 1.36668e-109
whvh_9015_a02r 2012 3' Shoot with heat shock treatment 701bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 373 4.02718e-101
whvs_17095_a22r 2012 3' Liquid cultured tissue 740bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 283 3.59326e-74
whvs_3061_d14f 2012 5' Liquid cultured tissue 730bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 431 1.35513e-118
whvs_3061_d14r 2012 3' Liquid cultured tissue 726bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 305 1.10033e-80
whxa_29031_a06r 2012 3' Root 82bp Contig7285            
whxb_38041_g09r 2012 3' Root 329bp Contig7285            
whxd_19031_a05f 2012 5' Root, treated at 50 microM Al for 6h 220bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 139 3.12534e-31
whxe_1059_f13f 2012 5' Seedling, infected with leaf rust 655bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 298 8.19911e-79
whxe_1059_f13r 2012 3' Seedling, infected with leaf rust 631bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 229 7.29732e-58
whxf_22058_h15r 2012 3' Seedling, infected with leaf rust 391bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 190 1.19049e-46
whxf_20087_i22f 2012 5' Seedling, infected with leaf rust 368bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 98 7.99352e-19
whxf_20087_i22r 2012 3' Seedling, infected with leaf rust 324bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 131 8.68548e-29
whxf_22006_k03f 2012 5' Seedling, infected with leaf rust 559bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 177 1.40913e-42
whxf_22006_k03r 2012 3' Seedling, infected with leaf rust 359bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 52 5.08954e-05
whxg_40095_b22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 625bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 344 8.92411e-93
whxh_27039_i10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 554bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 197 2.16137e-48
HX005234 whxi_3024_i08r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 328bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 52 5.12746e-05
HX037400 whxl_1022_l08r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 311bp Contig7285            
HX038855 whxl_17052_n16f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 342bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 229 2.29953e-58
HX038869 whxl_17052_n16r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 299bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 65 7.62735e-09
HX047692 whxm_7004_m03r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 421bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 146 2.01159e-33
HX053880 whxn_36078_c19r 2012 3' Leaves, plant was grown at constant 23Ž 762bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 286 5.89962e-75
HX062523 whxn_24008_j03r 2012 3' Leaves, plant was grown at constant 23Ž 549bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 145 9.37217e-33
HX091116 whxp_39059_e14r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 550bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 192 3.91939e-47
HX149583 whxs_11092_e24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 837bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 453 3.31104e-125
whyd_5011_d13r 2012 3' Spikelet at late flowering 498bp Contig7285       PREDICTED:uncharacterizedWDrepeat-containingproteinC2A9.03-like[Brachypodiumdistachyon] 161 1.01378e-37
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