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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 27
First Previous 1-27 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_15070_j11f 2012 5' Crown of seedling 586bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 6.33675e-99
whdl_15070_j11r 2012 3' Crown of seedling 286bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.83718e-13
whdp_17046_d11f 2012 5' Seed DPA20 481bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 7.01458e-31
whdp_17046_d11r 2012 3' Seed DPA20 468bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 157 1.13745e-36
whdp_10084_m24r 2012 3' Seed DPA20 522bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 7.04526e-53
whem_19022_l08f 2012 5' Dormant seed with water absorption 545bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.75548e-100
whem_19022_l08r 2012 3' Dormant seed with water absorption 607bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.51694e-67
whr_25024_m14r 2012 3' Root 183bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 1.55796e-14
whrd_15066_o20f 2012 5' Root of dessiccated seed 541bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.03404e-100
whrd_15066_o20r 2012 3' Root of dessiccated seed 613bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 7.03291e-79
whvd_16032_a07f 2012 5' Shoot grown with dessication 738bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 483 3.06163e-134
whvd_16032_a07r 2012 3' Shoot grown with dessication 716bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.95649e-66
whxb_23069_k18f 2012 5' Root 42bp Contig7270            
whxb_27021_l05f 2012 5' Root 130bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 87 1.42699e-15
whxb_16020_n07r 2012 3' Root 569bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.10587e-66
whxc_24029_c06f 2012 5' Root, treated at 50 microM Al for 6h 46bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.270523
whxc_17023_i06r 2012 3' Root, treated at 50 microM Al for 6h 605bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.41013e-60
whxe_17074_g19r 2012 3' Seedling, infected with leaf rust 594bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 3.11296e-65
whxf_39017_o06f 2012 5' Seedling, infected with leaf rust 551bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 2.54956e-102
whxh_15043_e10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 656bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 2.41467e-78
HX028787 whxk_15052_n15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 483bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 1.55204e-38
HX036396 whxl_19087_j21r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 423bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 2.45901e-31
HX036397 whxl_20087_j21r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 350bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 2.30058e-21
HX081046 whxo_23037_l10r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 590bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.08988e-62
HX161083 whxs_3033_o10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 101bp Contig7270            
HX178627 whxt_26052_m15f 2012 5' Roots, 18 day old plants were grown hydroponically 751bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 503 2.96485e-140
HX178654 whxt_26052_m15r 2012 3' Roots, 18 day old plants were grown hydroponically 681bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.09476e-76
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