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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 157
First Previous 1-100 101-157 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_16033_o09f 2012 5' Callus 369bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 256 1.80938e-66
whcs_16065_p18f 2012 5' Callus 520bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 333 1.20068e-89
whcs_16065_p18r 2012 3' Callus 658bp Contig7088       aquaporinPIP1[Triticumaestivum] 279 3.98938e-73
whdl_1096_p06f 2012 5' Crown of seedling 496bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 308 5.15833e-82
whdl_1096_p06r 2012 3' Crown of seedling 200bp Contig7088       AGAP003460-PA[Anophelesgambiaestr.PEST] 36 4.96436
whdl_18080_p11r 2012 3' Crown of seedling 519bp Contig7088       aquaporin[Hordeumvulgare] 127 1.31301e-27
whf_2068_f23f 2012 5' Spike at flowering date 478bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 312 3.54457e-83
whf_2068_f23r 2012 3' Spike at flowering date 470bp Contig7088       aquaporin[Hordeumvulgare] 133 2.98695e-29
whf_3079_o11f 2012 5' Spike at flowering date 466bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 319 1.73058e-85
whf_3079_o11r 2012 3' Spike at flowering date 255bp Contig7088       AGAP003460-PA[Anophelesgambiaestr.PEST] 36 5.02235
whh_5001_a13f 2012 5' Spike at heading date 555bp Contig7088       aquaporinPIP1[Triticumaestivum] 372 2.92941e-101
whh_14008_n13f 2012 5' Spike at heading date 461bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 316 2.44396e-84
whr_18074_c11r 2012 3' Root 546bp Contig7088       aquaporin[Hordeumvulgare] 183 1.82063e-44
whr_24010_d07f 2012 5' Root 464bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 294 7.82073e-78
whr_1042_d15r 2012 3' Root 476bp Contig7088       aquaporin[Hordeumvulgare] 125 6.17277e-27
whr_14052_f22f 2012 5' Root 406bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 267 7.76108e-70
whr_14052_f22r 2012 3' Root 464bp Contig7088       aquaporin[Hordeumvulgare] 131 8.768e-29
whr_1044_g21f 2012 5' Root 428bp Contig7088       aquaporinPIP1[Triticumaestivum] 287 7.24041e-76
whr_24053_i10r 2012 3' Root 480bp Contig7088       aquaporin[Hordeumvulgare] 131 8.57474e-29
whr_1006_i13f 2012 5' Root 496bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 325 3.1222e-87
whrd_15095_a21f 2012 5' Root of dessiccated seed 551bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 369 2.38631e-100
whrd_6069_l18f 2012 5' Root of dessiccated seed 301bp Contig7088       aquaporin[Hordeumvulgare] 203 1.78798e-50
whrd_6069_l18r 2012 3' Root of dessiccated seed 596bp Contig7088       aquaporin[Hordeumvulgare] 186 4.74635e-45
whsc_17073_h17f 2012 5' Shoot grown with cold treatment 529bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 342 3.61697e-92
whsc_20006_l04f 2012 5' Shoot grown with cold treatment 515bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 338 6.24431e-91
whsc_20006_l04r 2012 3' Shoot grown with cold treatment 554bp Contig7088       aquaporin[Hordeumvulgare] 202 3.93894e-50
whsd_10074_h20f 2012 5' Shoot grown with dessication 595bp Contig7088       aquaporinPIP1[Triticumaestivum] 394 8.78668e-108
whsd_10074_h20r 2012 3' Shoot grown with dessication 618bp Contig7088       aquaporinPIP1[Triticumaestivum] 240 3.01095e-61
whsl_21070_i11f 2012 5' Seed DPA30 358bp Contig7088       AGAP003460-PA[Anophelesgambiaestr.PEST] 36 4.92962
whsl_23069_i11r 2012 3' Seed DPA30 40bp Contig7088            
whsp_18015_a01f 2012 5' 582bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 382 4.235e-104
whsp_18015_a01r 2012 3' 544bp Contig7088       aquaporin[Hordeumvulgare] 171 1.20246e-40
whv3_16018_o08f 2012 5' Shoot grown under cold condition for 3days 653bp Contig7088       aquaporinPIP1[Triticumaestivum] 417 1.21107e-114
whv3_16018_o08r 2012 3' Shoot grown under cold condition for 3days 659bp Contig7088       aquaporinPIP1[Triticumaestivum] 256 3.6602e-66
whva_6085_f06f 2012 5' Shoot with ABA treatment 576bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 299 3.43263e-79
whva_14023_j06f 2012 5' Shoot with ABA treatment 362bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 248 6.29533e-64
whvd_19032_b07f 2012 5' Shoot grown with dessication 654bp Contig7088       aquaporinPIP1[Triticumaestivum] 422 3.81063e-116
whvd_19032_b07r 2012 3' Shoot grown with dessication 551bp Contig7088       aquaporin[Hordeumvulgare] 191 1.16318e-46
whvd_17030_c08f 2012 5' Shoot grown with dessication 327bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 221 6.3818e-56
whvd_20030_c08f 2012 5' Shoot grown with dessication 556bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 356 1.66342e-96
whvd_17030_c08r 2012 3' Shoot grown with dessication 531bp Contig7088       aquaporin[Hordeumvulgare] 187 1.14012e-45
whvd_20012_e03f 2012 5' Shoot grown with dessication 578bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 377 1.00892e-102
whvd_20012_e03r 2012 3' Shoot grown with dessication 309bp Contig7088       aquaporin[Hordeumvulgare] 139 4.11088e-31
whvd_5075_e18f 2012 5' Shoot grown with dessication 664bp Contig7088       aquaporinPIP1[Triticumaestivum] 424 1.03905e-116
whvd_5075_e18r 2012 3' Shoot grown with dessication 583bp Contig7088       aquaporin[Hordeumvulgare] 219 6.09937e-55
whvd_17044_f12r 2012 3' Shoot grown with dessication 535bp Contig7088       aquaporin[Hordeumvulgare] 193 1.66162e-47
whvh_2032_a08f 2012 5' Shoot with heat shock treatment 303bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 189 3.47671e-46
whvh_2032_a08r 2012 3' Shoot with heat shock treatment 638bp Contig7088       aquaporin[Hordeumvulgare] 214 2.49403e-53
whvh_19094_c23f 2012 5' Shoot with heat shock treatment 634bp Contig7088       aquaporinPIP1[Triticumaestivum] 406 1.98132e-111
whvh_19094_c23r 2012 3' Shoot with heat shock treatment 692bp Contig7088       aquaporinPIP1[Triticumaestivum] 295 7.91843e-78
whvh_19094_c24f 2012 5' Shoot with heat shock treatment 72bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 54 1.69813e-05
whvs_8039_j10r 2012 3' Liquid cultured tissue 57bp Contig7088       unknown[Lotusjaponicus] 41 0.0901744
whxa_1041_h09f 2012 5' Root 563bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 364 6.33869e-99
whxa_1041_h09r 2012 3' Root 657bp Contig7088       aquaporinPIP1[Triticumaestivum] 278 8.99449e-73
whxa_5052_m15f 2012 5' Root 307bp Contig7088       aquaporin[Triticumaestivum] 207 9.41142e-52
whxa_5052_m15r 2012 3' Root 603bp Contig7088       aquaporinPIP1[Triticumaestivum] 244 1.50659e-62
whxa_5034_o12f 2012 5' Root 361bp Contig7088       aquaporinPIP1[Triticumaestivum] 246 2.39222e-63
whxa_5034_o12r 2012 3' Root 555bp Contig7088       aquaporin[Hordeumvulgare] 192 4.07617e-47
whxb_9075_f18r 2012 3' Root 326bp Contig7088       PREDICTED:aquaporinPIP1-5-like[Brachypodiumdistachyon] 46 0.00281353
whxb_24074_g20r 2012 3' Root 370bp Contig7088       PREDICTED:aquaporinPIP1-5-like[Brachypodiumdistachyon] 77 1.90701e-12
whxb_18089_g22f 2012 5' Root 480bp Contig7088       aquaporin[Triticumaestivum] 316 1.43908e-84
whxb_18089_g22r 2012 3' Root 531bp Contig7088       aquaporin[Hordeumvulgare] 192 3.54418e-47
whxb_13071_i18f 2012 5' Root 511bp Contig7088       aquaporinPIP1[Triticumaestivum] 345 3.81579e-93
whxb_13071_i18r 2012 3' Root 643bp Contig7088       aquaporin[Hordeumvulgare] 214 1.50012e-53
whxb_19038_k12f 2012 5' Root 482bp Contig7088       PREDICTED:aquaporinPIP1-5-like[Brachypodiumdistachyon] 38 0.983474
whxb_19038_k12r 2012 3' Root 480bp Contig7088       PREDICTED:aquaporinPIP1-5-like[Brachypodiumdistachyon] 74 9.48164e-12
whxb_29036_m11r 2012 3' Root 589bp Contig7088       aquaporin[Hordeumvulgare] 187 1.58111e-45
whxb_36003_n01r 2012 3' Root 778bp Contig7088       aquaporinPIP1[Triticumaestivum] 333 3.34481e-89
whxb_34017_p05f 2012 5' Root 661bp Contig7088       aquaporinPIP1[Triticumaestivum] 245 6.46086e-63
whxb_34017_p05r 2012 3' Root 681bp Contig7088       aquaporinPIP1[Triticumaestivum] 269 7.59908e-70
whxc_31086_k23f 2012 5' Root, treated at 50 microM Al for 6h 357bp Contig7088       aquaporin[Hordeumvulgare] 182 5.56227e-44
whxd_15043_f10f 2012 5' Root, treated at 50 microM Al for 6h 277bp Contig7088       unnamedproteinproduct[MycobacteriumintracellulareMOTT-64] 35 6.42267
whxd_15043_f10r 2012 3' Root, treated at 50 microM Al for 6h 213bp Contig7088       unnamedproteinproduct[MycobacteriumintracellulareMOTT-64] 36 4.89922
whxd_34089_g22r 2012 3' Root, treated at 50 microM Al for 6h 387bp Contig7088       aquaporin[Hordeumvulgare] 103 1.91391e-20
whxd_24022_k07f 2012 5' Root, treated at 50 microM Al for 6h 459bp Contig7088       aquaporinPIP1[Triticumaestivum] 275 3.67663e-72
whxd_24022_k07r 2012 3' Root, treated at 50 microM Al for 6h 602bp Contig7088       aquaporinPIP1[Triticumaestivum] 239 3.65549e-61
whxf_26050_o16r 2012 3' Seedling, infected with leaf rust 213bp Contig7088       AGAP003460-PA[Anophelesgambiaestr.PEST] 36 4.89922
HX002329 whxi_17078_d20f 2012 5' Two-week old seedlingsi22 16L-8Dj 373bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 240 1.74562e-61
HX002340 whxi_17078_d20r 2012 3' Two-week old seedlingsi22 16L-8Dj 280bp Contig7088       AGAP003460-PA[Anophelesgambiaestr.PEST] 36 4.90022
HX006626 whxi_14053_k13f 2012 5' Two-week old seedlingsi22 16L-8Dj 419bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 279 2.6078e-73
HX007526 whxi_7085_l22f 2012 5' Two-week old seedlingsi22 16L-8Dj 283bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 190 1.18181e-46
HX009061 whxi_9033_o10f 2012 5' Two-week old seedlingsi22 16L-8Dj 398bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 261 5.60758e-68
HX009279 whxi_7066_o19f 2012 5' Two-week old seedlingsi22 16L-8Dj 218bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 136 3.45547e-30
HX013313 whxj_3044_f12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 417bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 269 2.62369e-70
HX017778 whxj_9036_m12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 265bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 163 1.58591e-38
HX017792 whxj_9036_m12r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 260bp Contig7088       AGAP003460-PA[Anophelesgambiaestr.PEST] 36 5.0049
HX018054 whxj_9084_m23f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 258bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 159 3.00136e-37
HX018085 whxj_9084_m24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 238bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 153 2.77235e-35
HX022224 whxk_10077_d18f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 414bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 265 4.9687e-69
HX024160 whxk_19058_g15f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 402bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 259 2.76037e-67
HX024174 whxk_19058_g15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 400bp Contig7088       aquaporin[Hordeumvulgare] 102 5.66303e-20
HX027151 whxk_19006_l03f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 377bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 240 1.73872e-61
HX041980 whxm_5093_c22f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 396bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 261 5.60758e-68
HX045844 whxm_7023_j05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 304bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 194 8.30547e-48
HX047266 whxm_18038_l12f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 307bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 193 2.4077e-47
HX047278 whxm_18038_l12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 768bp Contig7088       aquaporinPIP1[Triticumaestivum] 329 7.9662e-88
HX047968 whxm_14051_m14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 307bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 194 8.24481e-48
HX049612 whxm_10018_p08f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 307bp Contig7088       aquaporin[Triticumaestivum] 208 4.2246e-52
HX049614 whxm_11018_p08f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 348bp Contig7088       aquaporin[Triticumaestivum] 237 1.474e-60
HX049623 whxm_11018_p08r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 325bp Contig7088       PREDICTED:aquaporinPIP1-5-like[Brachypodiumdistachyon] 55 6.07958e-06
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