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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 14
First Previous 1-14 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_18033_p09f 2012 5' Seed DPA20 356bp Contig7006       unknown[Medicagotruncatula] 234 1.23821e-59
whhg_20031_a06f 2012 5' Anther at meiosis of MT4B CS wheat 565bp Contig7006       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 332 3.54961e-89
whkv_4063_a13f 2012 5' Shoot grown with continuous light after cold treatment 569bp Contig7006       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 336 1.87324e-90
whrd_6071_j18f 2012 5' Root of dessiccated seed 482bp Contig7006       Ubiquitin-likeprotein[Medicagotruncatula] 302 3.65152e-80
whsd_4081_o21f 2012 5' Shoot grown with dessication 529bp Contig7006       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 311 6.83715e-83
whva_9001_a13f 2012 5' Shoot with ABA treatment 351bp Contig7006       Ubiquitin-likeprotein[Medicagotruncatula] 205 3.63902e-51
whvd_9005_l02f 2012 5' Shoot grown with dessication 566bp Contig7006       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 334 9.3411e-90
whxe_10024_i08f 2012 5' Seedling, infected with leaf rust 496bp Contig7006       Ubiquitin-likeprotein[Medicagotruncatula] 300 1.3983e-79
HX005811 whxi_5023_j06f 2012 5' Two-week old seedlings(22℃ 16L-8D) 68bp Contig7006       ubiquitin/40sribosomalproteinS27afusion[StereumhirsutumFP-91666SS1] 46 0.00248519
HX009081 whxi_14034_o11f 2012 5' Two-week old seedlings(22℃ 16L-8D) 263bp Contig7006       Ubiquitin-likeprotein[Medicagotruncatula] 160 1.34255e-37
HX014263 whxj_7090_g23f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 246bp Contig7006       ubiquitin[AspergillusclavatusNRRL1] 145 7.49827e-33
HX027331 whxk_8037_l09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 352bp Contig7006       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 198 7.55862e-49
HX169179 whxt_10092_e23f 2012 5' Roots, 18 day old plants were grown hydroponically 721bp Contig7006       unnamedproteinproduct[Vitisvinifera] 445 6.74709e-123
whyd_28028_h02f 2012 5' Spikelet at late flowering 306bp Contig7006       unknown[Medicagotruncatula] 188 5.93036e-46
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