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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 33
First Previous 1-33 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_20034_o12f 2012 5' 583bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 359 3.83929e-97
whca_20082_o23f 2012 5' 178bp Contig70       40SribosomalproteinSA-likeprotein,partial[Miscanthussinensis] 119 3.35695e-25
whcs_2029_c06f 2012 5' Callus 634bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 306 2.79047e-81
whdl_15049_a04f 2012 5' Crown of seedling 40bp Contig70            
whdl_3018_b08f 2012 5' Crown of seedling 358bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 179 3.60536e-43
whdl_23093_h18f 2012 5' Crown of seedling 469bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 264 8.6287e-69
whdl_10006_j19f 2012 5' Crown of seedling 331bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 180 1.23902e-43
whei_8003_m02f 2012 5' Dormant seed with water absorption after breaking 576bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 362 4.38652e-98
whem_18033_p10f 2012 5' Dormant seed with water absorption 548bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 337 9.85206e-91
whkv_1067_n18f 2012 5' Shoot grown with continuous light after cold treatment 196bp Contig70       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 130 2.54265e-28
whms_16050_p16f 2012 5' Seed DPA5 of DT3DL CS wheat 595bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 354 1.31605e-95
whoh_3026_d14f 2012 5' Pistil at heading date 348bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 172 5.82328e-41
whok_3088_j23f 2012 5' Seed DPA5 778bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 462 6.23531e-128
whpc_10059_f14f 2012 5' Anther at meiosis 678bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 422 4.06644e-116
whsd_8012_f04f 2012 5' Shoot grown with dessication 595bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 359 4.09105e-97
whsl_27070_i05f 2012 5' Seed DPA30 388bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 250 1.26604e-64
whsl_19087_m18f 2012 5' Seed DPA30 525bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 348 6.44519e-94
whsp_5019_m06f 2012 5' 606bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 401 9.77425e-110
whsp_2019_n05f 2012 5' 609bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 407 1.36388e-111
whvh_4032_a07f 2012 5' Shoot with heat shock treatment 683bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 410 2.13539e-112
whxa_11091_f21f 2012 5' Root 371bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 232 2.79795e-59
whxc_28005_l02f 2012 5' Root, treated at 50 microM Al for 6h 447bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 274 8.33447e-72
whxc_30005_l02f 2012 5' Root, treated at 50 microM Al for 6h 304bp Contig70       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 195 3.71454e-48
whxc_28033_o09f 2012 5' Root, treated at 50 microM Al for 6h 260bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 156 1.94543e-36
whxc_29033_o09f 2012 5' Root, treated at 50 microM Al for 6h 56bp Contig70       40SribosomalproteinSA-likeprotein,partial[Miscanthussinensis] 40 0.190315
whxc_25065_o18f 2012 5' Root, treated at 50 microM Al for 6h 361bp Contig70       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 246 2.39222e-63
whxf_23018_o07f 2012 5' Seedling, infected with leaf rust 566bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 337 1.10343e-90
HX002413 whxi_3094_d23f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 322bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 196 2.88207e-48
HX058012 whxn_22091_f21f 2012 5' Leaves, plant was grown at constant 23Ž 630bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 405 7.42994e-111
HX115515 whxq_30074_h19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 616bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 381 6.40714e-104
HX115517 whxq_31074_h19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 605bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 371 6.25681e-101
whyd_19043_g09f 2012 5' Spikelet at late flowering 568bp Contig70       hypotheticalproteinSORBIDRAFT_02g039270[Sorghumbicolor] 340 1.30344e-91
whyd_10079_o05f 2012 5' Spikelet at late flowering 558bp Contig70       40SribosomalproteinSA-likeprotein,partial[Miscanthussinensis] 370 1.89879e-100
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