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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 44
First Previous 1-44 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_8060_h10f 2012 5' Seed DPA10 464bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 310 1.37729e-82
whr_22008_m07f 2012 5' Root 567bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 364 6.45393e-99
whrd_16015_a01f 2012 5' Root of dessiccated seed 567bp Contig6987       dehydrin[Triticumdurum] 253 2.07975e-75
whrd_13031_a05r 2012 3' Root of dessiccated seed 572bp Contig6987       dehydrin[Triticumdurum] 228 8.62642e-68
whrd_19061_d13r 2012 3' Root of dessiccated seed 529bp Contig6987       dehydrin[Triticumdurum] 235 5.65506e-70
whrd_17091_e21r 2012 3' Root of dessiccated seed 585bp Contig6987       dehydrin[Triticumdurum] 235 7.75268e-70
whrd_8022_k08r 2012 3' Root of dessiccated seed 337bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 228 5.16195e-58
whsc_5062_d15f 2012 5' Shoot grown with cold treatment 696bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 406 3.21904e-111
whsc_12066_o19r 2012 3' Shoot grown with cold treatment 586bp Contig6987       dehydrin[Triticumdurum] 232 4.97385e-69
whsd_12045_c09f 2012 5' Shoot grown with dessication 50bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 37 0.839574
whsd_11094_c23r 2012 3' Shoot grown with dessication 607bp Contig6987       dehydrin[Triticumdurum] 251 9.43201e-75
whsd_17094_c24r 2012 3' Shoot grown with dessication 583bp Contig6987       dehydrin[Triticumdurum] 235 7.75268e-70
whsd_11092_e24f 2012 5' Shoot grown with dessication 519bp Contig6987       dehydrin[Triticumdurum] 143 1.07244e-42
whsd_6036_m11r 2012 3' Shoot grown with dessication 565bp Contig6987       dehydrin[Triticumdurum] 207 1.86441e-61
whsd_6036_m12f 2012 5' Shoot grown with dessication 578bp Contig6987       dehydrin[Triticumdurum] 182 4.61689e-54
whv_163044_f12r 2012 3' Shoot grown under cold condition for 16days 59bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 41 0.0901744
whv_1614073_h17r 2012 3' Shoot grown under cold condition for 16days 590bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 295 7.03173e-78
whv_165089_h22r 2012 3' Shoot grown under cold condition for 16days 209bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 145 4.40483e-33
whv3_7049_p14f 2012 5' Shoot grown under cold condition for 3days 599bp Contig6987       dehydrin[Triticumdurum] 145 4.33876e-43
whv3_7049_p14r 2012 3' Shoot grown under cold condition for 3days 579bp Contig6987       dehydrin[Triticumdurum] 171 1.00814e-50
whva_12011_e01r 2012 3' Shoot with ABA treatment 578bp Contig6987       dehydrin[Triticumdurum] 228 8.92737e-68
whvd_2040_i12f 2012 5' Shoot grown with dessication 461bp Contig6987       dehydrin[Triticumdurum] 100 7.3807e-30
whvd_8017_o05r 2012 3' Shoot grown with dessication 94bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 67 1.98385e-09
whxc_22045_c09r 2012 3' Root, treated at 50 microM Al for 6h 446bp Contig6987       dehydrin[Triticumdurum] 97 1.47939e-27
whxd_8027_e06f 2012 5' Root, treated at 50 microM Al for 6h 568bp Contig6987       dehydrin[Triticumdurum] 249 2.96224e-74
whxd_12037_l10r 2012 3' Root, treated at 50 microM Al for 6h 305bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 203 1.36401e-50
whxe_4039_i09f 2012 5' Seedling, infected with leaf rust 317bp Contig6987       dehydrin[Triticumdurum] 56 3.5908e-06
whxe_4039_i09r 2012 3' Seedling, infected with leaf rust 303bp Contig6987       dehydrin[Triticumdurum] 56 2.13487e-13
whxe_37065_p18f 2012 5' Seedling, infected with leaf rust 289bp Contig6987       dehydrin[Triticumdurum] 48 0.000746832
whxf_22056_j15r 2012 3' Seedling, infected with leaf rust 399bp Contig6987       dehydrin[Triticumdurum] 97 6.22528e-29
whxf_26006_k03r 2012 3' Seedling, infected with leaf rust 318bp Contig6987       dehydrin[Triticumdurum] 56 4.02124e-16
whxf_27006_k03r 2012 3' Seedling, infected with leaf rust 390bp Contig6987       dehydrin[Triticumdurum] 94 3.86887e-28
whxf_11069_l18f 2012 5' Seedling, infected with leaf rust 613bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 358 9.76821e-97
whxg_37085_l21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 126bp Contig6987       dehydrin[Triticumdurum] 90 2.20829e-16
HX004455 whxi_19010_h03r 2012 3' Two-week old seedlings(22℃ 16L-8D) 387bp Contig6987       dehydrin[Triticumdurum] 98 4.72066e-29
HX004969 whxi_9089_h22r 2012 3' Two-week old seedlings(22℃ 16L-8D) 43bp Contig6987            
HX006568 whxi_7037_k10r 2012 3' Two-week old seedlings(22℃ 16L-8D) 397bp Contig6987       dehydrin[Triticumdurum] 56 2.51526e-15
HX006569 whxi_8037_k10r 2012 3' Two-week old seedlings(22℃ 16L-8D) 170bp Contig6987            
HX006570 whxi_9037_k10r 2012 3' Two-week old seedlings(22℃ 16L-8D) 195bp Contig6987            
HX009977 whxi_8082_p23r 2012 3' Two-week old seedlings(22℃ 16L-8D) 282bp Contig6987       dehydrin[Triticumdurum] 56 1.59196e-08
HX042062 whxm_20013_d01r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 415bp Contig6987       dehydrin[Triticumdurum] 96 1.3466e-28
HX045086 whxm_12090_h24f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 186bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 131 8.82439e-29
HX148303 whxs_10093_d22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 372bp Contig6987       dehydrin[Triticumdurum] 81 3.11726e-24
whxv_9096_b23r 2012 3' Leaves, plant was grown at constant 23℃ 745bp Contig6987       coldacclimationproteinWCOR410c[Triticumaestivum] 350 3.1547e-94
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