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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 125
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10027_e05f 2012 5' Callus 694bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 4.9778e-104
whcs_10027_e05r 2012 3' Callus 783bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 6.33074e-104
whcs_19024_i08f 2012 5' Callus 431bp Contig6930       40SribosomalproteinS9,partial[Triticumaestivum] 140 2.42812e-31
whcs_19024_i08r 2012 3' Callus 381bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 152 4.74911e-35
whdl_16051_e22r 2012 3' Crown of seedling 448bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 211 6.60589e-53
whdl_18075_g11f 2012 5' Crown of seedling 529bp Contig6930       40SribosomalproteinS9[Zeamays] 342 3.61697e-92
whdl_18075_g11r 2012 3' Crown of seedling 357bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 207 9.50267e-52
whdl_11062_l10r 2012 3' Crown of seedling 416bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 196 2.1613e-48
whdl_22078_l17f 2012 5' Crown of seedling 500bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 321 7.61965e-86
whdl_22078_l17r 2012 3' Crown of seedling 434bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 186 2.25254e-45
whe_3054_j22f 2012 5' Seed DPA10 534bp Contig6930       40SribosomalproteinS9[Zeamays] 344 7.4499e-93
whe_3054_j22r 2012 3' Seed DPA10 584bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 279 5.04928e-73
whe_18045_k15r 2012 3' Seed DPA10 480bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 209 3.22122e-52
whei_16023_i05f 2012 5' Dormant seed with water absorption after breaking 508bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 6.76715e-90
whei_16023_i05r 2012 3' Dormant seed with water absorption after breaking 620bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 322 4.67799e-86
whei_20083_n22f 2012 5' Dormant seed with water absorption after breaking 466bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 291 8.60871e-77
whei_20083_n22r 2012 3' Dormant seed with water absorption after breaking 612bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 316 2.49559e-84
whem_11029_d06f 2012 5' Dormant seed with water absorption 514bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 327 1.10222e-87
whem_11029_d06r 2012 3' Dormant seed with water absorption 638bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 319 4.21489e-85
whkv_12006_k04f 2012 5' Shoot grown with continuous light after cold treatment 709bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.23979e-104
whkv_12006_k04r 2012 3' Shoot grown with continuous light after cold treatment 687bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 4.82061e-104
whms_14033_p09f 2012 5' Seed DPA5 of DT3DL CS wheat 505bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 331 4.29668e-89
whms_14033_p09r 2012 3' Seed DPA5 of DT3DL CS wheat 666bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 1.84689e-89
whoh_26004_f07f 2012 5' Pistil at heading date 544bp Contig6930       40SribosomalproteinS9[Zeamays] 343 1.34725e-92
whoh_26004_f07r 2012 3' Pistil at heading date 480bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 209 3.22122e-52
whoh_8076_h23f 2012 5' Pistil at heading date 588bp Contig6930       40SribosomalproteinS9[Zeamays] 341 6.55104e-92
whoh_27053_i16r 2012 3' Pistil at heading date 401bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 218 5.42185e-55
whoh_12046_l03r 2012 3' Pistil at heading date 348bp Contig6930       40SribosomalproteinS9,partial[Triticumaestivum] 134 1.03426e-29
whoh_16023_m20f 2012 5' Pistil at heading date 489bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 322 2.65523e-86
whoh_16023_m20r 2012 3' Pistil at heading date 480bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 209 3.22122e-52
whoh_15096_p06f 2012 5' Pistil at heading date 537bp Contig6930       40SribosomalproteinS9[Zeamays] 348 7.03111e-94
whoh_15096_p06r 2012 3' Pistil at heading date 444bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 211 6.6345e-53
whoh_18073_p22f 2012 5' Pistil at heading date 263bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 168 4.92995e-40
whok_14037_l09f 2012 5' Seed DPA5 755bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 378 8.58381e-103
whok_14037_l09r 2012 3' Seed DPA5 751bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.89234e-104
whok_2066_p20r 2012 3' Seed DPA5 766bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 379 5.09572e-103
whr_22080_o11f 2012 5' Root 530bp Contig6930       40SribosomalproteinS9[Zeamays] 341 4.72391e-92
whsc_2014_d03r 2012 3' Shoot grown with cold treatment 697bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 5.34305e-90
whsc_4055_i14f 2012 5' Shoot grown with cold treatment 752bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.89234e-104
whsc_16037_k10r 2012 3' Shoot grown with cold treatment 601bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 328 7.81486e-88
whsl_10049_a16f 2012 5' Seed DPA30 573bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 368 4.52773e-100
whsl_10049_a16r 2012 3' Seed DPA30 602bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 284 9.90877e-75
whsl_28034_b21f 2012 5' Seed DPA30 515bp Contig6930       40SribosomalproteinS9[Zeamays] 334 5.28612e-90
whsl_27035_b21r 2012 3' Seed DPA30 368bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 166 2.39009e-39
whsl_28035_b21r 2012 3' Seed DPA30 293bp Contig6930       40SribosomalproteinS9,partial[Triticumaestivum] 132 3.91843e-29
whsl_14093_h12f 2012 5' Seed DPA30 609bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 252 5.61489e-65
whsl_14092_h12r 2012 3' Seed DPA30 558bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 258 8.05189e-67
whsl_23053_i22r 2012 3' Seed DPA30 459bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 207 9.41492e-52
whsl_9054_j10f 2012 5' Seed DPA30 578bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 376 1.72095e-102
whsl_9054_j10r 2012 3' Seed DPA30 595bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 286 2.58036e-75
whsp_3008_j03f 2012 5' 559bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 356 2.8909e-96
whsp_3008_j03r 2012 3' 386bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 174 8.86444e-42
whsp_9022_l07f 2012 5' 116bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 72 6.29941e-11
whv_164061_c13f 2012 5' Shoot grown under cold condition for 16days 696bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.0302e-104
whv_164061_c13r 2012 3' Shoot grown under cold condition for 16days 789bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 373 2.98895e-101
whv3_14084_m23f 2012 5' Shoot grown under cold condition for 3days 727bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 330 3.19407e-88
whv3_14084_m23r 2012 3' Shoot grown under cold condition for 3days 743bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 328 1.28377e-87
whvs_2025_g06f 2012 5' Liquid cultured tissue 694bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 4.9778e-104
whvs_2025_g06r 2012 3' Liquid cultured tissue 756bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.94448e-104
whvs_7024_j08f 2012 5' Liquid cultured tissue 753bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.89234e-104
whvs_7024_j08r 2012 3' Liquid cultured tissue 772bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 6.12317e-104
whxa_11048_a11f 2012 5' Root 338bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 216 2.64105e-54
whxa_11048_a11r 2012 3' Root 641bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 311 1.16273e-82
whxa_7073_h18f 2012 5' Root 408bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 259 2.74905e-67
whxa_7073_h18r 2012 3' Root 666bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.86025e-90
whxa_18088_j23f 2012 5' Root 475bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 302 3.68459e-80
whxa_18088_j23r 2012 3' Root 678bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 338 7.72252e-91
whxa_29037_k09f 2012 5' Root 520bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 9.19329e-90
whxa_29037_k09r 2012 3' Root 403bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 186 2.28322e-45
whxa_28037_k10f 2012 5' Root 43bp Contig6930            
whxa_27037_l10f 2012 5' Root 780bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 6.27884e-104
whxa_27037_l10r 2012 3' Root 641bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 319 5.5763e-85
whxa_19083_n21f 2012 5' Root 520bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 9.19329e-90
whxa_19083_n21r 2012 3' Root 635bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 326 2.60575e-87
whxb_6096_a23f 2012 5' Root 519bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 331 4.58412e-89
whxb_6096_a23r 2012 3' Root 353bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 141 8.39589e-32
whxb_3058_g16f 2012 5' Root 556bp Contig6930       40SribosomalproteinS9[Zeamays] 353 2.40197e-95
whxb_3058_g16r 2012 3' Root 641bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 314 1.05164e-83
whxb_12057_h14f 2012 5' Root 550bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 343 1.37474e-92
whxb_12057_h14r 2012 3' Root 615bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 3.97505e-90
whxb_8019_n06f 2012 5' Root 520bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 9.19329e-90
whxb_8019_n06r 2012 3' Root 330bp Contig6930       40SribosomalproteinS9,partial[Triticumaestivum] 126 2.78355e-27
whxc_28015_a01f 2012 5' Root, treated at 50 microM Al for 6h 410bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 254 1.15023e-65
whxc_28015_a01r 2012 3' Root, treated at 50 microM Al for 6h 492bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 224 9.84107e-57
whxc_18029_c06f 2012 5' Root, treated at 50 microM Al for 6h 122bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 83 2.71597e-14
whxc_35029_d06r 2012 3' Root, treated at 50 microM Al for 6h 666bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.86025e-90
whxc_32028_e07f 2012 5' Root, treated at 50 microM Al for 6h 325bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 208 7.30172e-52
whxc_32028_e07r 2012 3' Root, treated at 50 microM Al for 6h 364bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 143 2.84104e-32
whxc_16039_j10f 2012 5' Root, treated at 50 microM Al for 6h 606bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 243 3.35634e-62
whxc_16039_j10r 2012 3' Root, treated at 50 microM Al for 6h 557bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 255 6.81634e-66
whxc_12006_l04f 2012 5' Root, treated at 50 microM Al for 6h 576bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 328 7.01946e-88
whxc_12006_l04r 2012 3' Root, treated at 50 microM Al for 6h 641bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 319 5.5763e-85
whxc_30037_l10r 2012 3' Root, treated at 50 microM Al for 6h 470bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 222 3.74361e-56
whxc_27070_l19f 2012 5' Root, treated at 50 microM Al for 6h 407bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 259 2.74905e-67
whxc_27070_l19r 2012 3' Root, treated at 50 microM Al for 6h 364bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 144 9.7645e-33
whxd_7059_f13f 2012 5' Root, treated at 50 microM Al for 6h 520bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 9.19329e-90
whxd_7059_f13r 2012 3' Root, treated at 50 microM Al for 6h 623bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 308 9.25645e-82
whxd_38017_p05f 2012 5' Root, treated at 50 microM Al for 6h 520bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 334 9.19329e-90
whxd_38017_p05r 2012 3' Root, treated at 50 microM Al for 6h 478bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 220 1.40992e-55
whxe_36004_m03f 2012 5' Seedling, infected with leaf rust 518bp Contig6930       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 327 1.12911e-87
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