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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 115
First Previous 1-100 101-115 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_17092_h24f 2012 5' Crown of seedling 195bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 104 1.14399e-20
whdp_4016_a03r 2012 3' Seed DPA20 469bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.38595e-57
whdp_9067_n18f 2012 5' Seed DPA20 540bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.84227e-65
whdp_9067_n18r 2012 3' Seed DPA20 521bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.57909e-65
whe_25029_k20f 2012 5' Seed DPA10 578bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.1973e-65
whe_25029_k20r 2012 3' Seed DPA10 422bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 3.52618e-54
whei_4062_c16f 2012 5' Dormant seed with water absorption after breaking 513bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.54876e-65
whei_4062_c16r 2012 3' Dormant seed with water absorption after breaking 585bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.27178e-65
whei_4077_d17f 2012 5' Dormant seed with water absorption after breaking 524bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.61668e-65
whei_4077_d17r 2012 3' Dormant seed with water absorption after breaking 537bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.76707e-65
whei_4077_d18f 2012 5' Dormant seed with water absorption after breaking 539bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.80467e-65
whei_4077_d18r 2012 3' Dormant seed with water absorption after breaking 534bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.72947e-65
whei_1089_g22f 2012 5' Dormant seed with water absorption after breaking 472bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 2.85363e-56
whei_1089_g22r 2012 3' Dormant seed with water absorption after breaking 489bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 236 1.92491e-60
whei_1068_m19f 2012 5' Dormant seed with water absorption after breaking 412bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.71168e-61
whei_1068_m19r 2012 3' Dormant seed with water absorption after breaking 560bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 4.65841e-62
whei_11033_p09f 2012 5' Dormant seed with water absorption after breaking 532bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.72947e-65
whei_11033_p09r 2012 3' Dormant seed with water absorption after breaking 528bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.65428e-65
whei_9049_p14f 2012 5' Dormant seed with water absorption after breaking 430bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.50683e-65
whei_9049_p14r 2012 3' Dormant seed with water absorption after breaking 567bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.09551e-65
whem_12044_e12f 2012 5' Dormant seed with water absorption 426bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.51961e-65
whem_20087_j21f 2012 5' Dormant seed with water absorption 434bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 154 9.48578e-36
whem_20087_j21r 2012 3' Dormant seed with water absorption 409bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.49347e-44
whem_14020_m08f 2012 5' Dormant seed with water absorption 400bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.52088e-65
whem_14020_m08r 2012 3' Dormant seed with water absorption 520bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.57909e-65
whf_24030_l20f 2012 5' Spike at flowering date 567bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.09551e-65
whf_24031_l20r 2012 3' Spike at flowering date 459bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.49616e-65
whh_27072_m17f 2012 5' Spike at heading date 430bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.1209e-63
whh_27072_m17r 2012 3' Spike at heading date 361bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 6.97646e-55
whkv_18083_n21r 2012 3' Shoot grown with continuous light after cold treatment 313bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 4.38006e-17
whms_9048_b11f 2012 5' Seed DPA5 of DT3DL CS wheat 641bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.87722e-65
whms_9048_b11r 2012 3' Seed DPA5 of DT3DL CS wheat 521bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.69495e-51
whoh_21074_d11f 2012 5' Pistil at heading date 576bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.16006e-65
whoh_21074_d11r 2012 3' Pistil at heading date 516bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.54876e-65
whoh_21069_i05f 2012 5' Pistil at heading date 551bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.90841e-65
whoh_21069_i05r 2012 3' Pistil at heading date 475bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.50962e-65
whoh_16014_l19f 2012 5' Pistil at heading date 516bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.54876e-65
whoh_16014_l19r 2012 3' Pistil at heading date 433bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.50044e-65
whok_16014_c04f 2012 5' Seed DPA5 589bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.34627e-65
whok_16014_c04r 2012 3' Seed DPA5 534bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.72947e-65
whok_4091_e22f 2012 5' Seed DPA5 473bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.50962e-65
whok_4091_e22r 2012 3' Seed DPA5 444bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.52243e-65
whok_3092_f23f 2012 5' Seed DPA5 538bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.76707e-65
whok_3092_f23r 2012 3' Seed DPA5 516bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.54876e-65
whok_10056_i16f 2012 5' Seed DPA5 565bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.77396e-64
whok_10056_i16r 2012 3' Seed DPA5 543bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.55957e-64
whok_14072_i20f 2012 5' Seed DPA5 647bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.95099e-65
whok_14072_i20r 2012 3' Seed DPA5 567bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.09551e-65
whr_10095_l18f 2012 5' Root 323bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.55593e-14
whr_10095_l18r 2012 3' Root 373bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.64526e-35
whsc_18096_a24f 2012 5' Shoot grown with cold treatment 294bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 7.10802e-47
whsc_18096_a24r 2012 3' Shoot grown with cold treatment 46bp Contig6827       PREDICTED:60SribosomalproteinL22-2-likeisoform2[Brachypodiumdistachyon] 34 8.70242
whsc_9037_l10r 2012 3' Shoot grown with cold treatment 532bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.72947e-65
whsl_13018_b20r 2012 3' Seed DPA30 117bp Contig6827            
whsl_24089_c24r 2012 3' Seed DPA30 40bp Contig6827            
whsl_24075_g05f 2012 5' Seed DPA30 580bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.23454e-65
whsl_24075_g05r 2012 3' Seed DPA30 466bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 3.53508e-54
whsl_22078_l05f 2012 5' Seed DPA30 581bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.23454e-65
whsl_22078_l05r 2012 3' Seed DPA30 485bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.52858e-65
whsl_14057_p09f 2012 5' Seed DPA30 482bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.00135e-53
whsl_14048_p09r 2012 3' Seed DPA30 354bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.01921e-53
whsp_11089_g21f 2012 5' 135bp Contig6827            
whsp_11089_g21r 2012 3' 168bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 1.25436e-11
whv3_18072_i19f 2012 5' Shoot grown under cold condition for 3days 674bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 3.23048e-65
whv3_17072_i19r 2012 3' Shoot grown under cold condition for 3days 455bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 3.25761e-44
whvs_16089_g21f 2012 5' Liquid cultured tissue 663bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 3.13543e-65
whvs_16089_g21r 2012 3' Liquid cultured tissue 603bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.44628e-65
whxa_19031_a05f 2012 5' Root 544bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.83357e-65
whxa_19031_a05r 2012 3' Root 511bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.51809e-65
whxa_22013_c01f 2012 5' Root 557bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.98325e-65
whxa_22013_c01r 2012 3' Root 519bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.57909e-65
whxa_26012_e03f 2012 5' Root 655bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 3.06166e-65
whxa_26012_e03r 2012 3' Root 570bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.12281e-65
whxb_34047_b10f 2012 5' Root 179bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 3.84085e-21
whxb_34047_b10r 2012 3' Root 616bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.63161e-65
whxb_2044_e11f 2012 5' Root 539bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.80467e-65
whxb_2044_e11r 2012 3' Root 510bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.51099e-65
whxb_2044_e12f 2012 5' Root 521bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 247 8.66473e-64
whxb_2044_e12r 2012 3' Root 326bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 1.0911e-47
whxb_31073_h17f 2012 5' Root 471bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 5.77556e-57
whxb_32073_h17f 2012 5' Root 404bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 3.2835e-44
whxb_31073_h17r 2012 3' Root 432bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.45909e-62
whxb_35039_i10r 2012 3' Root 178bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 112 5.35946e-23
whxb_21005_k02r 2012 3' Root 625bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.7428e-65
whxb_24001_o01f 2012 5' Root 455bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.97293e-50
whxb_24001_o01r 2012 3' Root 389bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.44776e-62
whxb_30082_o24f 2012 5' Root 332bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 3.39773e-17
whxb_30082_o24r 2012 3' Root 301bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 117 1.68518e-24
whxc_10064_a15f 2012 5' Root, treated at 50 microM Al for 6h 535bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.76707e-65
whxc_12064_a15f 2012 5' Root, treated at 50 microM Al for 6h 535bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.76707e-65
whxc_10064_a15r 2012 3' Root, treated at 50 microM Al for 6h 530bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.69188e-65
whxc_12064_a15r 2012 3' Root, treated at 50 microM Al for 6h 535bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.76707e-65
whxc_38010_h03f 2012 5' Root, treated at 50 microM Al for 6h 259bp Contig6827       unknown[Lotusjaponicus] 37 1.32167
whxc_38010_h03r 2012 3' Root, treated at 50 microM Al for 6h 213bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 55 5.97502e-06
whxc_37006_l04f 2012 5' Root, treated at 50 microM Al for 6h 388bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.36842e-26
whxc_37006_l04r 2012 3' Root, treated at 50 microM Al for 6h 349bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.00608e-33
whxd_10042_g12r 2012 3' Root, treated at 50 microM Al for 6h 92bp Contig6827            
whxe_37086_k23f 2012 5' Seedling, infected with leaf rust 358bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 7.48284e-57
whxe_37086_k23r 2012 3' Seedling, infected with leaf rust 549bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.87099e-65
HX026523 whxk_6021_k05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 534bp Contig6827       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.72947e-65
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