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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 82
First Previous 1-82 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_2046_c11r 2012 3' Callus 560bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.35539e-61
whcs_9029_d06f 2012 5' Callus 650bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.00416e-61
whcs_16022_l07f 2012 5' Callus 679bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.1915e-61
whcs_17049_o14r 2012 3' Callus 494bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 203 2.33705e-50
whdp_18083_m22r 2012 3' Seed DPA20 58bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 42 0.0404775
whdp_11033_p09r 2012 3' Seed DPA20 230bp Contig6803            
whe_22034_a15f 2012 5' Seed DPA10 576bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.47387e-61
whe_22034_a15r 2012 3' Seed DPA10 535bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 193 1.66162e-47
whe_15074_c05f 2012 5' Seed DPA10 414bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.7974e-61
whe_15074_c05r 2012 3' Seed DPA10 428bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 147 1.16943e-33
whei_9095_b21f 2012 5' Dormant seed with water absorption after breaking 561bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.38049e-61
whei_9095_b21r 2012 3' Dormant seed with water absorption after breaking 606bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 238 1.0797e-60
whei_15077_c17f 2012 5' Dormant seed with water absorption after breaking 446bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.02119e-61
whei_15077_c17r 2012 3' Dormant seed with water absorption after breaking 581bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.49885e-61
whei_4020_m07f 2012 5' Dormant seed with water absorption after breaking 547bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.25499e-61
whei_4020_m07r 2012 3' Dormant seed with water absorption after breaking 607bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 238 1.09581e-60
whem_16077_d18f 2012 5' Dormant seed with water absorption 465bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.02164e-61
whem_16077_d18r 2012 3' Dormant seed with water absorption 530bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.13485e-61
whem_2034_o11f 2012 5' Dormant seed with water absorption 337bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 190 2.02688e-46
whem_2034_o11r 2012 3' Dormant seed with water absorption 499bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 211 6.51054e-53
whf_21030_l08f 2012 5' Spike at flowering date 507bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.02304e-61
whf_21030_l08r 2012 3' Spike at flowering date 489bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 161 6.02554e-38
whh_23004_e01f 2012 5' Spike at heading date 531bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.13485e-61
whh_23004_e01r 2012 3' Spike at heading date 466bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 147 1.18228e-33
whh_25032_o02f 2012 5' Spike at heading date 553bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 4.95972e-61
whh_25031_o02r 2012 3' Spike at heading date 441bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 158 4.98696e-37
whhg_6096_a23f 2012 5' Anther at meiosis of MT4B CS wheat 563bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.38049e-61
whhg_6096_a23r 2012 3' Anther at meiosis of MT4B CS wheat 537bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.2105e-61
whkp_14069_l18f 2012 5' Shoot grown under continuous light 496bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.00675e-61
whms_15046_c12f 2012 5' Seed DPA5 of DT3DL CS wheat 601bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.64087e-61
whms_15046_c12r 2012 3' Seed DPA5 of DT3DL CS wheat 603bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 229 4.94054e-58
whms_20054_k15f 2012 5' Seed DPA5 of DT3DL CS wheat 648bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.00416e-61
whms_20054_k15r 2012 3' Seed DPA5 of DT3DL CS wheat 658bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.07839e-61
whms_9083_n21f 2012 5' Seed DPA5 of DT3DL CS wheat 598bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.61601e-61
whms_9083_n21r 2012 3' Seed DPA5 of DT3DL CS wheat 565bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 206 2.93764e-51
whoh_21051_e16f 2012 5' Pistil at heading date 504bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.02304e-61
whoh_21052_f22r 2012 3' Pistil at heading date 152bp Contig6803            
whok_14010_h04f 2012 5' Seed DPA5 575bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.44888e-61
whok_14010_h04r 2012 3' Seed DPA5 537bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.18529e-61
whok_12026_h07f 2012 5' Seed DPA5 555bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.33029e-61
whok_12026_h07r 2012 3' Seed DPA5 142bp Contig6803       hypotheticalproteinSORBIDRAFT_07g026170[Sorghumbicolor] 94 1.51057e-17
whsd_17031_a05f 2012 5' Shoot grown with dessication 639bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.92993e-61
whsd_17031_a05r 2012 3' Shoot grown with dessication 582bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.49885e-61
whsl_9057_c22f 2012 5' Seed DPA30 575bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.44888e-61
whsl_9057_c22r 2012 3' Seed DPA30 544bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 229 3.72066e-58
whv_1610025_h06f 2012 5' Shoot grown under cold condition for 16days 655bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.05364e-61
whv_1610025_h06r 2012 3' Shoot grown under cold condition for 16days 637bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.90519e-61
whv_1610073_h17f 2012 5' Shoot grown under cold condition for 16days 641bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.92993e-61
whv_1610073_h17r 2012 3' Shoot grown under cold condition for 16days 632bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.8557e-61
whv3_7089_g21f 2012 5' Shoot grown under cold condition for 3days 698bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.36387e-61
whv3_7089_g21r 2012 3' Shoot grown under cold condition for 3days 549bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 198 7.28567e-49
whva_15071_j17f 2012 5' Shoot with ABA treatment 555bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.30519e-61
whva_15071_j17r 2012 3' Shoot with ABA treatment 533bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 237 1.2826e-60
whva_15071_j18f 2012 5' Shoot with ABA treatment 555bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.30519e-61
whva_15071_j18r 2012 3' Shoot with ABA treatment 372bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 190 2.07982e-46
whvs_14088_j24f 2012 5' Liquid cultured tissue 655bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.05364e-61
whvs_14088_j24r 2012 3' Liquid cultured tissue 249bp Contig6803            
whxa_18082_p23f 2012 5' Root 493bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.01603e-61
whxa_18082_p23r 2012 3' Root 604bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.66574e-61
whxb_20088_j24f 2012 5' Root 365bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 233 1.59834e-59
whxb_20088_j24r 2012 3' Root 521bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 205 4.93156e-51
whxc_33086_l24f 2012 5' Root, treated at 50 microM Al for 6h 360bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 204 1.04249e-50
whxc_33086_l24r 2012 3' Root, treated at 50 microM Al for 6h 452bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 136 2.05888e-30
whxe_26065_o18f 2012 5' Seedling, infected with leaf rust 570bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.4239e-61
whxe_26065_o18r 2012 3' Seedling, infected with leaf rust 538bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.2105e-61
whxe_27065_o18r 2012 3' Seedling, infected with leaf rust 388bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 230 1.77786e-58
whxf_39058_h16f 2012 5' Seedling, infected with leaf rust 622bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.81491e-61
whxf_40058_h16f 2012 5' Seedling, infected with leaf rust 676bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.1915e-61
whxg_35095_a22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 412bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 146 3.36388e-33
whxh_13001_p01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 527bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.10963e-61
whxh_13001_p01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 514bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.03885e-61
whxh_38081_p22f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 601bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.64087e-61
whxh_38081_p22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 565bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 229 4.15654e-58
HX053518 whxn_35061_c13f 2012 5' Leaves, plant was grown at constant 23 183bp Contig6803            
HX053547 whxn_35061_c13r 2012 3' Leaves, plant was grown at constant 23 159bp Contig6803       unknown[Zeamays] 52 3.93319e-05
HX060220 whxn_22042_h11f 2012 5' Leaves, plant was grown at constant 23 181bp Contig6803            
HX060251 whxn_22042_h11r 2012 3' Leaves, plant was grown at constant 23 137bp Contig6803       unknown[Zeamays] 51 0.000112634
HX093610 whxp_17041_g09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 665bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.12787e-61
HX095157 whxp_40042_h12f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 647bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.97942e-61
HX095186 whxp_40042_h12r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 593bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 229 4.81376e-58
whxv_7014_d04f 2012 5' Leaves, plant was grown at constant 23 658bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 2.07839e-61
whxv_7014_d04r 2012 3' Leaves, plant was grown at constant 23 639bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.90519e-61
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