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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 24
First Previous 1-24 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whrd_11031_b05f 2012 5' Root of dessiccated seed 233bp Contig6794       unknown[Zeamays] 44 0.0107057
whrd_11031_b05r 2012 3' Root of dessiccated seed 186bp Contig6794       unknown[Zeamays] 44 0.0108624
whv3_20092_f23f 2012 5' Shoot grown under cold condition for 3days 381bp Contig6794       unknown[Zeamays] 53 2.29884e-05
whv3_20092_f23r 2012 3' Shoot grown under cold condition for 3days 349bp Contig6794       unknown[Zeamays] 53 2.32017e-05
whxa_23077_d17f 2012 5' Root 694bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.78695e-69
whxa_23077_d17r 2012 3' Root 613bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 1.33871e-45
whxa_12038_l12r 2012 3' Root 732bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 5.59243e-96
whxb_18058_h16r 2012 3' Root 661bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 5.8858e-80
whxc_27039_i10r 2012 3' Root, treated at 50 microM Al for 6h 395bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 6.31236e-19
whxd_22094_d23r 2012 3' Root, treated at 50 microM Al for 6h 254bp Contig6794       unknown[Zeamays] 54 1.78835e-05
whxd_29057_g13f 2012 5' Root, treated at 50 microM Al for 6h 251bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 52 6.56918e-05
whxd_29057_g13r 2012 3' Root, treated at 50 microM Al for 6h 230bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.72536e-14
whxg_33084_n23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 322bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 9.00084e-34
HX002668 whxi_6028_e08r 2012 3' Two-week old seedlings(22℃ 16L-8D) 83bp Contig6794            
HX007155 whxi_9022_l08f 2012 5' Two-week old seedlings(22℃ 16L-8D) 320bp Contig6794       unknown[Lotusjaponicus] 104 8.77089e-21
HX049038 whxm_8018_o08f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 388bp Contig6794       PREDICTED:ras-relatedproteinRABE1c-like[Brachypodiumdistachyon] 193 1.84407e-47
HX049052 whxm_8018_o08r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 348bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 101 9.70283e-20
HX148888 whxs_1043_e10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 751bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 2.082e-93
HX165770 whxt_26029_c05f 2012 5' Roots, 18 day old plants were grown hydroponically 614bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 152 6.233e-35
HX165796 whxt_26029_c05r 2012 3' Roots, 18 day old plants were grown hydroponically 596bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 4.15801e-41
HX182875 whxu_7015_a02f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 739bp Contig6794       PREDICTED:ras-relatedproteinRABE1c-like[Brachypodiumdistachyon] 373 4.4622e-101
HX192200 whxu_3090_h23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 478bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 2.76481e-19
HX193146 whxu_25072_i19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 739bp Contig6794       PREDICTED:ras-relatedproteinRABE1c-like[Brachypodiumdistachyon] 375 1.18514e-101
HX194065 whxu_3055_j13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 471bp Contig6794       predictedprotein[Hordeumvulgaresubsp.vulgare] 97 1.81633e-18
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