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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 51
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_2091_f21f 2012 5' Seed DPA20 100bp Contig670            
whdp_2091_f21r 2012 3' Seed DPA20 73bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.0175729
whe_16039_m03r 2012 3' Seed DPA10 136bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 53 2.97322e-05
whem_1031_b06f 2012 5' Dormant seed with water absorption 40bp Contig670            
whh_26023_m14r 2012 3' Spike at heading date 336bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 2.26186e-13
whhg_16001_o01r 2012 3' Anther at meiosis of MT4B CS wheat 730bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 270 3.99807e-70
whkp_8064_b15r 2012 3' Shoot grown under continuous light 705bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 274 2.59847e-71
whms_10091_e22r 2012 3' Seed DPA5 of DT3DL CS wheat 566bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 234 1.00731e-59
whms_9027_f05r 2012 3' Seed DPA5 of DT3DL CS wheat 599bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 232 4.40082e-59
whok_6061_c13r 2012 3' Seed DPA5 787bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 2.43667e-87
whpc_14037_k10r 2012 3' Anther at meiosis 54bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 36 2.59546
whr_24074_d11r 2012 3' Root 471bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 146 1.99889e-33
whrd_5016_a03f 2012 5' Root of dessiccated seed 435bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.01818e-21
whrd_5016_a03r 2012 3' Root of dessiccated seed 404bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 128 9.59793e-28
whsc_18055_i13r 2012 3' Shoot grown with cold treatment 625bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 209 5.93207e-52
whsc_18055_i14r 2012 3' Shoot grown with cold treatment 525bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 203 2.56405e-50
whsd_9042_g12f 2012 5' Shoot grown with dessication 255bp Contig670            
whvh_7078_d19r 2012 3' Shoot with heat shock treatment 648bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 232 5.45784e-59
whxb_24059_e14r 2012 3' Root 436bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 145 7.48403e-33
whxc_15016_b04f 2012 5' Root, treated at 50 microM Al for 6h 648bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 207 1.85698e-51
whxc_15016_b04r 2012 3' Root, treated at 50 microM Al for 6h 604bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 190 1.94732e-46
whxc_38078_c19r 2012 3' Root, treated at 50 microM Al for 6h 540bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 165 8.61741e-39
whxc_23030_d07f 2012 5' Root, treated at 50 microM Al for 6h 350bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 181 7.3494e-44
whxc_23030_d07r 2012 3' Root, treated at 50 microM Al for 6h 466bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 166 2.44866e-39
whxc_9027_f05f 2012 5' Root, treated at 50 microM Al for 6h 617bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 215 1.03725e-53
whxc_9027_f05r 2012 3' Root, treated at 50 microM Al for 6h 586bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 230 1.60276e-58
whxc_22024_j07r 2012 3' Root, treated at 50 microM Al for 6h 572bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 191 1.29385e-46
whxc_18072_j19r 2012 3' Root, treated at 50 microM Al for 6h 588bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 190 1.83806e-46
whxc_34021_l06f 2012 5' Root, treated at 50 microM Al for 6h 394bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 76 2.49534e-12
whxc_34021_l06r 2012 3' Root, treated at 50 microM Al for 6h 370bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 88 6.33364e-16
whxd_5054_k16f 2012 5' Root, treated at 50 microM Al for 6h 700bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 242 8.20914e-62
whxd_5054_k16r 2012 3' Root, treated at 50 microM Al for 6h 642bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 209 6.30257e-52
whxe_6075_f18f 2012 5' Seedling, infected with leaf rust 665bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 301 1.01578e-79
whxe_6075_f18r 2012 3' Seedling, infected with leaf rust 406bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.69999e-14
whxg_40087_j21f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 526bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 200 1.6242e-49
whxg_40087_j21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 558bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 211 8.64271e-53
whxh_9072_j20f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 609bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 274 1.82857e-71
whxh_9072_j20r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 588bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 190 1.83806e-46
whxh_5001_p01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 577bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 192 4.60295e-47
HX016541 whxj_6053_k14r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 526bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 206 2.95999e-51
HX038579 whxl_8004_n04r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 388bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.67685e-14
HX038848 whxl_8052_n15r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 398bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 2.31391e-13
HX040110 whxl_8065_p18r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 387bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 1.68734e-08
HX111360 whxq_7094_d24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 227bp Contig670            
HX111361 whxq_8094_d24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 231bp Contig670            
HX127060 whxr_13013_c02r 2012 3' Roots, 18 day old plants were grown hydroponically 796bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 294 2.36029e-77
HX140279 whxr_27003_n01r 2012 3' Roots, 18 day old plants were grown hydroponically 718bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 276 4.11038e-72
HX170236 whxt_5076_f19f 2012 5' Roots, 18 day old plants were grown hydroponically 650bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 200 3.00177e-49
HX170265 whxt_5076_f19r 2012 3' Roots, 18 day old plants were grown hydroponically 625bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 220 2.53837e-55
HX174409 whxt_24008_j04r 2012 3' Roots, 18 day old plants were grown hydroponically 740bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 274 2.84711e-71
HX186956 whxu_29061_d13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 721bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 276 4.15068e-72
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