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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 202
First Previous 1-100 101-200 201-202 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_17101_p06r 2012 3' Spike at heading date 123bp Contig6652            
whkp_4090_g23f 2012 5' Shoot grown under continuous light 742bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 8.22639e-95
whkp_4090_g23r 2012 3' Shoot grown under continuous light 732bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 2.10526e-95
whkp_1072_i20f 2012 5' Shoot grown under continuous light 120bp Contig6652       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 94 1.1781e-17
whkp_19021_l06f 2012 5' Shoot grown under continuous light 210bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 55 5.99488e-06
whkv_5031_b05r 2012 3' Shoot grown with continuous light after cold treatment 504bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 220 1.06817e-55
whkv_13028_f07f 2012 5' Shoot grown with continuous light after cold treatment 660bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.10648e-97
whkv_13028_f07r 2012 3' Shoot grown with continuous light after cold treatment 732bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.83668e-97
whkv_12054_k15f 2012 5' Shoot grown with continuous light after cold treatment 673bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.20064e-97
whkv_12054_k15r 2012 3' Shoot grown with continuous light after cold treatment 733bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 2.12512e-95
whkv_7054_k16f 2012 5' Shoot grown with continuous light after cold treatment 732bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.87288e-97
whkv_7054_k16r 2012 3' Shoot grown with continuous light after cold treatment 712bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.61951e-97
whpc_8024_i07f 2012 5' Anther at meiosis 758bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.16244e-97
whpc_5066_p20f 2012 5' Anther at meiosis 732bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 2.32764e-94
whpc_5066_p20r 2012 3' Anther at meiosis 677bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 1.96383e-94
whsd_9051_n13f 2012 5' Shoot grown with dessication 622bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 5.51314e-95
whsd_9051_n13r 2012 3' Shoot grown with dessication 582bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 295 6.69688e-78
whsh_3034_b03f 2012 5' - 215bp Contig6652            
whsh_3034_b03r 2012 3' - 190bp Contig6652            
whsh_4034_b03r 2012 3' - 170bp Contig6652            
whsh_5075_d17f 2012 5' - 117bp Contig6652            
whsh_5074_d17r 2012 3' - 98bp Contig6652            
whsh_3096_p06r 2012 3' - 108bp Contig6652            
whv_1617092_e24f 2012 5' Shoot grown under cold condition for 16days 568bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 4.32906e-95
whv_1617092_e24r 2012 3' Shoot grown under cold condition for 16days 690bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 2.19756e-88
whv_161076_f20f 2012 5' Shoot grown under cold condition for 16days 651bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.14768e-95
whv_161076_f20r 2012 3' Shoot grown under cold condition for 16days 743bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.98146e-97
whv_1620038_k11f 2012 5' Shoot grown under cold condition for 16days 268bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 93 2.00141e-17
whv_168038_l12f 2012 5' Shoot grown under cold condition for 16days 715bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 8.42779e-94
whv_168038_l12r 2012 3' Shoot grown under cold condition for 16days 682bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.24389e-96
whv_164053_l13f 2012 5' Shoot grown under cold condition for 16days 404bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 144 1.29419e-32
whv_1619020_m08f 2012 5' Shoot grown under cold condition for 16days 737bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 8.15092e-95
whv_168035_n10f 2012 5' Shoot grown under cold condition for 16days 672bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.16427e-97
whv_168035_n10r 2012 3' Shoot grown under cold condition for 16days 725bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.76429e-97
whv3_13032_b07f 2012 5' Shoot grown under cold condition for 3days 670bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.17957e-97
whv3_13032_b07r 2012 3' Shoot grown under cold condition for 3days 694bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.876e-95
whv3_7048_b12f 2012 5' Shoot grown under cold condition for 3days 362bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 95 5.22207e-18
whv3_7048_b12r 2012 3' Shoot grown under cold condition for 3days 330bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 106 2.28238e-21
whv3_15014_c03f 2012 5' Shoot grown under cold condition for 3days 666bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.14302e-97
whv3_15014_c03r 2012 3' Shoot grown under cold condition for 3days 682bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 4.0553e-87
whv3_3093_d21f 2012 5' Shoot grown under cold condition for 3days 721bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 7.77356e-95
whv3_3093_d21r 2012 3' Shoot grown under cold condition for 3days 663bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.95482e-83
whv3_15093_d22f 2012 5' Shoot grown under cold condition for 3days 730bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 8.84501e-94
whv3_15093_d22r 2012 3' Shoot grown under cold condition for 3days 660bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.25217e-82
whv3_7090_g24f 2012 5' Shoot grown under cold condition for 3days 728bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.44418e-96
whv3_7090_g24r 2012 3' Shoot grown under cold condition for 3days 631bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 1.78936e-88
whv3_6039_i09f 2012 5' Shoot grown under cold condition for 3days 662bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.10648e-97
whv3_6039_i09r 2012 3' Shoot grown under cold condition for 3days 709bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.36827e-96
whv3_6023_j06f 2012 5' Shoot grown under cold condition for 3days 657bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.15268e-96
whv3_6023_j06r 2012 3' Shoot grown under cold condition for 3days 618bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 5.27797e-82
whv3_18072_j20f 2012 5' Shoot grown under cold condition for 3days 664bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.14302e-97
whv3_17072_j20r 2012 3' Shoot grown under cold condition for 3days 659bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.25217e-82
whv3_7038_k12f 2012 5' Shoot grown under cold condition for 3days 669bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.20824e-96
whv3_7038_k12r 2012 3' Shoot grown under cold condition for 3days 675bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 6.67375e-95
whv3_9085_k21f 2012 5' Shoot grown under cold condition for 3days 677bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.23702e-97
whv3_9085_k21r 2012 3' Shoot grown under cold condition for 3days 728bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.46341e-96
whv3_7086_l23f 2012 5' Shoot grown under cold condition for 3days 729bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.44418e-96
whv3_7086_l23r 2012 3' Shoot grown under cold condition for 3days 711bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.6371e-97
whv3_13036_m12f 2012 5' Shoot grown under cold condition for 3days 669bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.20824e-96
whva_18074_g19f 2012 5' Shoot with ABA treatment 644bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 6.65608e-94
whva_18074_g20f 2012 5' Shoot with ABA treatment 639bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 1.72943e-94
whva_8069_i05r 2012 3' Shoot with ABA treatment 499bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 207 1.23352e-51
whvd_7032_a07f 2012 5' Shoot grown with dessication 754bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.12625e-97
whvd_7032_a07r 2012 3' Shoot grown with dessication 661bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.95482e-83
whvd_11047_b09f 2012 5' Shoot grown with dessication 710bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.6371e-97
whvd_9063_b13f 2012 5' Shoot grown with dessication 791bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.50241e-97
whvd_9063_b13r 2012 3' Shoot grown with dessication 659bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 293 2.70189e-77
whvd_1021_k05f 2012 5' Shoot grown with dessication 710bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 7.58381e-95
whvd_1021_k05r 2012 3' Shoot grown with dessication 218bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 104 1.11417e-20
whvh_1027_e06r 2012 3' Shoot with heat shock treatment 621bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 3.96015e-85
whvh_4060_e15f 2012 5' Shoot with heat shock treatment 716bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.4409e-85
whvh_4060_e15r 2012 3' Shoot with heat shock treatment 650bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 4.43384e-85
whvh_13060_e16r 2012 3' Shoot with heat shock treatment 744bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.98146e-97
whvh_4043_f10f 2012 5' Shoot with heat shock treatment 662bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.10648e-97
whvh_4043_f10r 2012 3' Shoot with heat shock treatment 691bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 6.67233e-93
whvh_14042_g11r 2012 3' Shoot with heat shock treatment 648bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.07861e-83
whvh_7089_h21f 2012 5' Shoot with heat shock treatment 739bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.94527e-97
whvh_7089_h21r 2012 3' Shoot with heat shock treatment 665bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 3.59608e-93
whvh_11008_i03r 2012 3' Shoot with heat shock treatment 284bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 204 7.90877e-51
whvh_10024_i08f 2012 5' Shoot with heat shock treatment 527bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 187 1.90154e-45
whvh_10024_i08r 2012 3' Shoot with heat shock treatment 567bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 259 3.81892e-67
whvh_9088_i23f 2012 5' Shoot with heat shock treatment 724bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.76429e-97
whvh_9088_i23r 2012 3' Shoot with heat shock treatment 715bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.61986e-95
whvh_14007_j01f 2012 5' Shoot with heat shock treatment 750bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.09005e-97
whvh_14007_j01r 2012 3' Shoot with heat shock treatment 705bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.95583e-95
whvh_3024_j07f 2012 5' Shoot with heat shock treatment 670bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.16427e-97
whvh_4087_j22f 2012 5' Shoot with heat shock treatment 645bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.92374e-97
whvh_4087_j22r 2012 3' Shoot with heat shock treatment 680bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 1.16694e-86
whvh_5003_m02f 2012 5' Shoot with heat shock treatment 738bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 8.15092e-95
whvh_5003_m02r 2012 3' Shoot with heat shock treatment 672bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 4.14227e-89
whvh_13019_m06f 2012 5' Shoot with heat shock treatment 766bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 4.61958e-96
whvh_13019_m06r 2012 3' Shoot with heat shock treatment 714bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.98609e-95
whvh_8002_p03f 2012 5' Shoot with heat shock treatment 715bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.61986e-95
whvh_8002_p03r 2012 3' Shoot with heat shock treatment 641bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 1.85203e-88
whvh_18002_p04f 2012 5' Shoot with heat shock treatment 766bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.21426e-97
whvh_18002_p04r 2012 3' Shoot with heat shock treatment 743bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 2.1847e-95
whxe_11059_f14f 2012 5' Seedling, infected with leaf rust 291bp Contig6652       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 185 6.65291e-45
whxe_2042_h11r 2012 3' Seedling, infected with leaf rust 666bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 2.06572e-88
whxe_31067_m17f 2012 5' Seedling, infected with leaf rust 630bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.04158e-96
whxe_32067_m17f 2012 5' Seedling, infected with leaf rust 629bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.04659e-96
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