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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 1759
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_11061_k10r 2012 3' Crown of seedling 574bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 281 7.40681e-74
whdl_3040_n09f 2012 5' Crown of seedling 273bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.01481e-45
whdl_3049_n09r 2012 3' Crown of seedling 242bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.9794e-05
whdp_4030_d08f 2012 5' Seed DPA20 421bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.14225e-28
whdp_9009_g01f 2012 5' Seed DPA20 617bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 261 1.26208e-67
whdp_9009_g01r 2012 3' Seed DPA20 536bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 217 1.83288e-54
whe_24082_b24r 2012 3' Seed DPA10 475bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 299 2.399e-79
whe_1057_c04f 2012 5' Seed DPA10 452bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 148 6.83805e-34
whe_1057_c04r 2012 3' Seed DPA10 370bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 146 3.44414e-33
whe_25035_e21f 2012 5' Seed DPA10 197bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 132 3.90996e-29
whe_25035_e21r 2012 3' Seed DPA10 505bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.35764e-52
whe_9097_n24r 2012 3' Seed DPA10 461bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.3736e-52
whe_24095_o24f 2012 5' Seed DPA10 547bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 241 9.60912e-62
whe_24095_o24r 2012 3' Seed DPA10 469bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 242 3.51134e-62
whe_24048_p03f 2012 5' Seed DPA10 494bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 9.70565e-89
whe_3096_p18f 2012 5' Seed DPA10 61bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0326237
whf_22033_a21f 2012 5' Spike at flowering date 371bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 259 2.13735e-67
whf_13089_c18f 2012 5' Spike at flowering date 509bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 322 2.6611e-86
whf_1084_e06f 2012 5' Spike at flowering date 529bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 7.28794e-93
whf_1084_e06r 2012 3' Spike at flowering date 553bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 282 5.10875e-74
whf_3075_g05r 2012 3' Spike at flowering date 453bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.26427e-52
whf_27059_g16f 2012 5' Spike at flowering date 50bp Contig6477       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 40 0.129528
whf_13027_g20f 2012 5' Spike at flowering date 448bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 310 1.36469e-82
whf_23086_j06f 2012 5' Spike at flowering date 555bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 3.64423e-88
whf_23086_j06r 2012 3' Spike at flowering date 530bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 225 3.77786e-57
whf_24006_j19f 2012 5' Spike at flowering date 90bp Contig6477       hypotheticalproteinSCHCODRAFT_258494[SchizophyllumcommuneH4-8] 35 8.37906
whf_11007_j19r 2012 3' Spike at flowering date 331bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 103 3.28335e-20
whf_25072_n11f 2012 5' Spike at flowering date 528bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 338 6.66972e-91
whf_25072_n11r 2012 3' Spike at flowering date 425bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 196 2.20452e-48
whf_23015_o01r 2012 3' Spike at flowering date 347bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 2.47315e-15
whf_16079_o11f 2012 5' Spike at flowering date 466bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 3.16782e-87
whf_16079_o11r 2012 3' Spike at flowering date 446bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 143 1.69893e-32
whf_24064_p04f 2012 5' Spike at flowering date 555bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 326 2.36212e-87
whf_24073_p04r 2012 3' Spike at flowering date 451bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.26427e-52
whh_27083_b12f 2012 5' Spike at heading date 339bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 238 6.49006e-61
whh_27083_b12r 2012 3' Spike at heading date 462bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.22166e-52
whh_9042_c03f 2012 5' Spike at heading date 509bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 7.48196e-89
whh_18074_c17f 2012 5' Spike at heading date 156bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 3.01652e-21
whh_18074_c17r 2012 3' Spike at heading date 386bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 156 3.26264e-36
whh_24026_c20f 2012 5' Spike at heading date 404bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 188 4.58174e-46
whh_27093_h06f 2012 5' Spike at heading date 428bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 293 1.72334e-77
whh_27093_h06r 2012 3' Spike at heading date 460bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.41492e-52
whh_22012_h07f 2012 5' Spike at heading date 455bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 319 2.22996e-85
whh_22012_h07r 2012 3' Spike at heading date 461bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.22166e-52
whh_12060_h10f 2012 5' Spike at heading date 495bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 321 5.88821e-86
whh_12061_h10r 2012 3' Spike at heading date 462bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.22166e-52
whh_24008_m01f 2012 5' Spike at heading date 503bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 3.39657e-94
whh_26008_m01f 2012 5' Spike at heading date 526bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 2.02622e-92
whh_26007_m01r 2012 3' Spike at heading date 453bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 259 2.75058e-67
whh_26007_m13r 2012 3' Spike at heading date 198bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 103 2.54025e-20
whh_25024_m20f 2012 5' Spike at heading date 440bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 306 1.93396e-81
whh_25023_m20r 2012 3' Spike at heading date 383bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 185 3.86057e-45
whhg_16061_d13f 2012 5' Anther at meiosis of MT4B CS wheat 691bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whhg_16061_d13r 2012 3' Anther at meiosis of MT4B CS wheat 716bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whhg_15044_f12f 2012 5' Anther at meiosis of MT4B CS wheat 725bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whhg_15044_f12r 2012 3' Anther at meiosis of MT4B CS wheat 703bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.60769e-97
whhg_8090_g23r 2012 3' Anther at meiosis of MT4B CS wheat 564bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 284 1.08877e-74
whhg_8090_h23f 2012 5' Anther at meiosis of MT4B CS wheat 651bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whhg_8072_i19r 2012 3' Anther at meiosis of MT4B CS wheat 607bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.57138e-83
whhg_8072_j19f 2012 5' Anther at meiosis of MT4B CS wheat 722bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.37192e-98
whkp_10015_a02f 2012 5' Shoot grown under continuous light 512bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.53383e-49
whkp_10015_a02r 2012 3' Shoot grown under continuous light 499bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 235 4.22974e-60
whkp_8064_a16f 2012 5' Shoot grown under continuous light 769bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whkp_8064_a16r 2012 3' Shoot grown under continuous light 656bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
whkp_7096_a23f 2012 5' Shoot grown under continuous light 741bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whkp_7096_a23r 2012 3' Shoot grown under continuous light 58bp Contig6477       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 46 0.00280315
whkp_10016_b04f 2012 5' Shoot grown under continuous light 737bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 2.29172e-97
whkp_10016_b04r 2012 3' Shoot grown under continuous light 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 336 2.71682e-90
whkp_9031_b06f 2012 5' Shoot grown under continuous light 692bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 322 7.90009e-86
whkp_9031_b06r 2012 3' Shoot grown under continuous light 660bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.88347e-92
whkp_10062_c16f 2012 5' Shoot grown under continuous light 695bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whkp_10062_c16r 2012 3' Shoot grown under continuous light 719bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.82178e-97
whkp_12028_e08f 2012 5' Shoot grown under continuous light 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whkp_12028_e08r 2012 3' Shoot grown under continuous light 644bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.00409e-90
whkp_10059_e14f 2012 5' Shoot grown under continuous light 667bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.95505e-80
whkp_10059_e14r 2012 3' Shoot grown under continuous light 638bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 326 3.44799e-87
whkp_10011_f01f 2012 5' Shoot grown under continuous light 668bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 6.02429e-80
whkp_10011_f01r 2012 3' Shoot grown under continuous light 636bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 326 3.40321e-87
whkp_1011_f02f 2012 5' Shoot grown under continuous light 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whkp_1011_f02r 2012 3' Shoot grown under continuous light 731bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 1.90413e-96
whkp_19027_f05f 2012 5' Shoot grown under continuous light 730bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whkp_19027_f05r 2012 3' Shoot grown under continuous light 676bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.29906e-87
whkp_15044_f11f 2012 5' Shoot grown under continuous light 689bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whkp_15044_f11r 2012 3' Shoot grown under continuous light 606bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.22535e-98
whkp_10075_f17f 2012 5' Shoot grown under continuous light 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whkp_10075_f17r 2012 3' Shoot grown under continuous light 702bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whkp_8074_g20f 2012 5' Shoot grown under continuous light 395bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 173 1.54401e-41
whkp_8074_g20r 2012 3' Shoot grown under continuous light 265bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 2.7896e-35
whkp_7090_g24f 2012 5' Shoot grown under continuous light 716bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whkp_7090_g24r 2012 3' Shoot grown under continuous light 658bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.77664e-98
whkp_15041_h09f 2012 5' Shoot grown under continuous light 730bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 354 1.59673e-95
whkp_15041_h09r 2012 3' Shoot grown under continuous light 655bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
whkp_8042_h12f 2012 5' Shoot grown under continuous light 779bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whkp_8042_h12r 2012 3' Shoot grown under continuous light 700bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.56019e-97
whkp_12058_h15f 2012 5' Shoot grown under continuous light 757bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whkp_12058_h15r 2012 3' Shoot grown under continuous light 655bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whkp_12058_h16f 2012 5' Shoot grown under continuous light 721bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.37192e-98
whkp_12058_h16r 2012 3' Shoot grown under continuous light 582bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 7.38712e-85
whkp_13090_h24f 2012 5' Shoot grown under continuous light 369bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 101 1.27059e-19
whkp_2023_i06f 2012 5' Shoot grown under continuous light 755bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
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