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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 78
First Previous 1-78 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_10004_m04r 2012 3' Seed DPA20 355bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 125 8.10066e-27
whdp_4020_m08f 2012 5' Seed DPA20 425bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 169 2.88587e-40
whdp_4020_m08r 2012 3' Seed DPA20 371bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.65498e-41
whei_6022_k08f 2012 5' Dormant seed with water absorption after breaking 493bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 8.05098e-43
whei_6022_k08r 2012 3' Dormant seed with water absorption after breaking 481bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.53506e-45
whh_10056_n16f 2012 5' Spike at heading date 484bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.63926e-41
whh_10056_n16r 2012 3' Spike at heading date 353bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.57617e-41
whh_13080_p17f 2012 5' Spike at heading date 455bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 5.38205e-39
whh_13080_p17r 2012 3' Spike at heading date 360bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.48837e-41
whsd_18009_g01f 2012 5' Shoot grown with dessication 377bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 2.44879e-31
whsd_18009_g01r 2012 3' Shoot grown with dessication 347bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 7.90068e-38
whsd_18009_g02f 2012 5' Shoot grown with dessication 376bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 2.44879e-31
whsd_18009_g02r 2012 3' Shoot grown with dessication 361bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 7.74924e-38
whsd_3055_j13f 2012 5' Shoot grown with dessication 441bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.64129e-41
whsd_3055_j13r 2012 3' Shoot grown with dessication 416bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.44554e-41
whsp_7063_b13f 2012 5' 528bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 9.43725e-45
whsp_7063_b13r 2012 3' 508bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.66031e-45
whsp_16003_n02r 2012 3' 599bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 48 0.0015373
whsp_16051_n14r 2012 3' 63bp Contig6366            
whva_2025_c14f 2012 5' Shoot with ABA treatment 272bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 67 1.53057e-09
whva_2025_c14r 2012 3' Shoot with ABA treatment 259bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.82425e-13
whva_4046_l21f 2012 5' Shoot with ABA treatment 516bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.32508e-45
whva_4046_l21r 2012 3' Shoot with ABA treatment 483bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.23595e-45
whva_4062_l22r 2012 3' Shoot with ABA treatment 469bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 3.3018e-44
whvs_3087_j21f 2012 5' Liquid cultured tissue 445bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.60847e-41
whvs_3087_j21r 2012 3' Liquid cultured tissue 416bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.44554e-41
whxa_8063_a13f 2012 5' Root 358bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 2.34602e-42
whxa_8063_a13r 2012 3' Root 475bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.61201e-45
whxa_13078_c19f 2012 5' Root 364bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.48837e-41
whxa_13078_c19r 2012 3' Root 424bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 1.99853e-41
whxa_7011_f01f 2012 5' Root 402bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 9.55352e-44
whxa_7011_f01r 2012 3' Root 497bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.25323e-45
whxa_7011_f02r 2012 3' Root 40bp Contig6366            
whxb_8023_i06f 2012 5' Root 420bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 1.35181e-37
whxb_8023_i06r 2012 3' Root 397bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.66283e-41
whxc_37051_m14f 2012 5' Root, treated at 50 microM Al for 6h 515bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.78025e-45
whxc_37051_m14r 2012 3' Root, treated at 50 microM Al for 6h 471bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.26632e-45
whxc_11083_n21f 2012 5' Root, treated at 50 microM Al for 6h 369bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 3.4593e-30
whxc_11083_n21r 2012 3' Root, treated at 50 microM Al for 6h 354bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 159 3.87597e-37
whxd_10016_b03r 2012 3' Root, treated at 50 microM Al for 6h 75bp Contig6366       PREDICTED:coppertransportproteinATOX1-like[Brachypodiumdistachyon] 52 4.94081e-05
whxd_22027_f05r 2012 3' Root, treated at 50 microM Al for 6h 442bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 2.01087e-41
whxd_2086_k24f 2012 5' Root, treated at 50 microM Al for 6h 455bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 1.97632e-41
whxd_2086_k24r 2012 3' Root, treated at 50 microM Al for 6h 397bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.81649e-42
whxe_38060_e16f 2012 5' Seedling, infected with leaf rust 211bp Contig6366            
whxe_38060_e16r 2012 3' Seedling, infected with leaf rust 433bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.49862e-41
whxe_9085_l21f 2012 5' Seedling, infected with leaf rust 454bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.51002e-41
whxe_9085_l21r 2012 3' Seedling, infected with leaf rust 420bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.62634e-41
whxe_34051_m13r 2012 3' Seedling, infected with leaf rust 52bp Contig6366       PREDICTED:coppertransportproteinATOX1-like[Brachypodiumdistachyon] 36 1.98727
whxf_4082_p23f 2012 5' Seedling, infected with leaf rust 518bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.92889e-41
whxf_5082_p23f 2012 5' Seedling, infected with leaf rust 56bp Contig6366            
whxf_7082_p23f 2012 5' Seedling, infected with leaf rust 42bp Contig6366            
whxf_4082_p23r 2012 3' Seedling, infected with leaf rust 407bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 4.28071e-36
whxg_9089_h22f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 454bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 1.97632e-41
whxg_9089_h22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 420bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 2.00693e-41
whxh_35026_h08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 506bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 1.25639e-43
whxh_36026_h08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 488bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 2.36398e-42
whxh_35026_h08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 474bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.61201e-45
whxh_36026_h08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 474bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.61201e-45
whxh_18088_j23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 415bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.44554e-41
whxh_18088_j23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 388bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.47405e-41
HX057743 whxn_6060_f16f 2012 5' Leaves, plant was grown at constant 23 153bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 4.09923e-10
HX057772 whxn_6060_f16r 2012 3' Leaves, plant was grown at constant 23 463bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.49775e-45
HX075567 whxo_14059_e14f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 510bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.66031e-45
HX075568 whxo_15059_e14f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 479bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 2.32432e-42
HX075589 whxo_14059_e14r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 491bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.77978e-43
HX094201 whxp_11074_g20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 490bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 2.35323e-42
HX094231 whxp_11074_g20r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 483bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 8.72019e-45
HX133878 whxr_24073_h18r 2012 3' Roots, 18 day old plants were grown hydroponically 412bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.47658e-41
HX155446 whxs_16072_j20f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 607bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 1.43783e-44
HX155474 whxs_16072_j20r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 587bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 1.31724e-44
HX169199 whxt_6092_e23f 2012 5' Roots, 18 day old plants were grown hydroponically 453bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.54284e-41
HX169225 whxt_6092_e23r 2012 3' Roots, 18 day old plants were grown hydroponically 418bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.65827e-41
HX188557 whxu_14091_e22f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 512bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.55132e-41
HX188583 whxu_14091_e22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 469bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.57819e-41
whxw_2016_a03f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 477bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.51078e-41
whxw_2016_a03r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 444bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.52696e-44
whyd_21092_g18f 2012 5' Spikelet at late flowering 560bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 1.15274e-44
whyd_21092_g18r 2012 3' Spikelet at late flowering 473bp Contig6366       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.37812e-34
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