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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 47
First Previous 1-47 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_1059_e14r 2012 3' Seed DPA20 540bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 7.58212e-64
whem_2017_p06f 2012 5' Dormant seed with water absorption 386bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 119 3.38415e-25
whem_2017_p06r 2012 3' Dormant seed with water absorption 370bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 144 1.30877e-32
whf_25031_o02f 2012 5' Spike at flowering date 190bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 4.65969e-22
whf_24031_o02f 2012 5' Spike at flowering date 476bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 1.18529e-78
whf_24032_o02r 2012 3' Spike at flowering date 562bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 9.89325e-60
whms_11065_o17r 2012 3' Seed DPA5 of DT3DL CS wheat 575bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.00106e-70
whoh_12077_k17r 2012 3' Pistil at heading date 592bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 2.01309e-72
whoh_20081_n11r 2012 3' Pistil at heading date 593bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.48216e-70
whok_3010_h03r 2012 3' Seed DPA5 735bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 1.42215e-99
whr_9081_n17r 2012 3' Root 433bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.72072e-53
whrd_5016_a04r 2012 3' Root of dessiccated seed 582bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.65717e-60
whrd_5027_e06r 2012 3' Root of dessiccated seed 597bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 2.04901e-48
whsc_13096_a24r 2012 3' Shoot grown with cold treatment 599bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.48161e-78
whsd_15045_d10r 2012 3' Shoot grown with dessication 581bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.03558e-70
whsd_15093_d21f 2012 5' Shoot grown with dessication 424bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 1.24024e-75
whsd_15093_d21r 2012 3' Shoot grown with dessication 559bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.21908e-66
whsl_18094_k24r 2012 3' Seed DPA30 460bp Contig6310       predictedprotein[Populustrichocarpa] 36 4.8816
whsp_6015_a01r 2012 3' 88bp Contig6310       PREDICTED:translocon-associatedproteinsubunitalpha-like[Brachypodiumdistachyon] 65 5.80638e-09
whsp_17010_h04r 2012 3' 627bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 7.62315e-39
whsp_2021_k05r 2012 3' 597bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.63486e-21
whsp_11068_m19r 2012 3' 582bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 2.02106e-66
whv3_11088_j24r 2012 3' Shoot grown under cold condition for 3days 720bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 1.31309e-94
whva_5077_k05r 2012 3' Shoot with ABA treatment 537bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 8.67506e-60
whvh_13067_m18f 2012 5' Shoot with heat shock treatment 745bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 4.26371e-91
whvh_13067_m18r 2012 3' Shoot with heat shock treatment 742bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 5.71019e-88
whxa_28054_k16r 2012 3' Root 641bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 1.13143e-61
whxa_27051_n13r 2012 3' Root 506bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 7.06835e-71
whxd_14075_e17f 2012 5' Root, treated at 50 microM Al for 6h 556bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 1.50799e-89
whxd_14075_e17r 2012 3' Root, treated at 50 microM Al for 6h 626bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.60798e-65
whxd_3050_o15f 2012 5' Root, treated at 50 microM Al for 6h 637bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 3.54337e-108
whxd_3050_o15r 2012 3' Root, treated at 50 microM Al for 6h 612bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.73227e-77
whxf_30063_a13f 2012 5' Seedling, infected with leaf rust 461bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 283 1.34416e-74
whxf_31063_a13f 2012 5' Seedling, infected with leaf rust 404bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 5.56197e-68
whxf_32063_a13f 2012 5' Seedling, infected with leaf rust 473bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 4.23463e-76
whxg_39030_c08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 596bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.12188e-70
HX036139 whxl_9040_j12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 333bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 1.15432e-57
HX065876 whxn_25054_l15f 2012 5' Leaves, plant was grown at constant 23 561bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.07176e-94
HX065877 whxn_26054_l15f 2012 5' Leaves, plant was grown at constant 23 51bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.642839
HX065902 whxn_25054_l15r 2012 3' Leaves, plant was grown at constant 23 583bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.38736e-68
HX075488 whxo_6044_e11r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 605bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.96767e-62
HX123784 whxq_8017_p06f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 395bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.37104e-58
whxw_2003_n02f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 766bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 464 1.58663e-128
whxw_2003_n02r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 733bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 3.70752e-100
whxx_10083_n22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 738bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 459 4.73439e-127
whxx_10083_n22r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 653bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 3.92308e-89
whxy_5033_o10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 703bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 435 6.67547e-120
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