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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 228
First Previous 1-100 101-200 201-228 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_19028_f07f 2012 5' Callus 161bp Contig6257            
whcs_19028_f07r 2012 3' Callus 124bp Contig6257            
whcs_13074_g20f 2012 5' Callus 758bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 465 9.18732e-129
whcs_13074_g20r 2012 3' Callus 764bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 408 1.02437e-111
whcs_20042_h11f 2012 5' Callus 703bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 463 2.95904e-128
whcs_20042_h11r 2012 3' Callus 732bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 410 2.47536e-112
whcs_14049_p13f 2012 5' Callus 704bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 460 1.4837e-127
whcs_14049_p13r 2012 3' Callus 762bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 430 1.93682e-118
whcs_14049_p14f 2012 5' Callus 598bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 419 2.53846e-115
whcs_14049_p14r 2012 3' Callus 724bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 406 4.58024e-111
whdl_20073_c11f 2012 5' Crown of seedling 587bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 371 5.81761e-101
whdl_20073_c11r 2012 3' Crown of seedling 145bp Contig6257       unknown[Lotusjaponicus] 103 2.57766e-20
whdl_5058_d22f 2012 5' Crown of seedling 462bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 291 4.93585e-77
whdl_5058_d22r 2012 3' Crown of seedling 552bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 237 1.41531e-60
whdl_10059_g04f 2012 5' Crown of seedling 215bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 56 3.49124e-06
whdl_10060_g04r 2012 3' Crown of seedling 349bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 177 1.81022e-42
whdl_26091_g24f 2012 5' Crown of seedling 549bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 208 5.28494e-52
whdl_26091_g24r 2012 3' Crown of seedling 459bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 207 1.60594e-51
whdl_22040_n03f 2012 5' Crown of seedling 529bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 356 2.42051e-96
whdl_22040_n03r 2012 3' Crown of seedling 493bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 233 2.10888e-59
whdp_1015_a01r 2012 3' Seed DPA20 522bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 227 1.21187e-57
whdp_12032_a07f 2012 5' Seed DPA20 611bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 401 9.91799e-110
whdp_12032_a07r 2012 3' Seed DPA20 646bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 317 2.17333e-84
whdp_4037_l10f 2012 5' Seed DPA20 210bp Contig6257            
whdp_4037_l10r 2012 3' Seed DPA20 165bp Contig6257            
whdp_5068_m20f 2012 5' Seed DPA20 528bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 360 9.82713e-98
whdp_5068_m20r 2012 3' Seed DPA20 546bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.60629e-61
whdp_13083_m22f 2012 5' Seed DPA20 544bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 347 9.32998e-94
whdp_2082_p23f 2012 5' Seed DPA20 304bp Contig6257            
whdp_2082_p23r 2012 3' Seed DPA20 253bp Contig6257       PREDICTED:GTP-bindingnuclearproteinRan-3-like[Brachypodiumdistachyon] 49 0.000556115
whei_5031_a05f 2012 5' Dormant seed with water absorption after breaking 538bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 380 1.63486e-103
whei_5031_a05r 2012 3' Dormant seed with water absorption after breaking 624bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 321 8.09026e-86
whei_3029_c05f 2012 5' Dormant seed with water absorption after breaking 521bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 372 3.04624e-101
whei_3029_c05r 2012 3' Dormant seed with water absorption after breaking 613bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 348 1.01085e-93
whei_16055_j14f 2012 5' Dormant seed with water absorption after breaking 412bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 280 1.14756e-73
whei_16055_j14r 2012 3' Dormant seed with water absorption after breaking 537bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.54803e-61
whei_4070_l19f 2012 5' Dormant seed with water absorption after breaking 523bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 184 1.20453e-44
whei_4070_l19r 2012 3' Dormant seed with water absorption after breaking 498bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 212 3.83452e-53
whei_10019_m06f 2012 5' Dormant seed with water absorption after breaking 390bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 259 2.72549e-67
whei_10019_m06r 2012 3' Dormant seed with water absorption after breaking 537bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.54803e-61
whem_1015_b01f 2012 5' Dormant seed with water absorption 208bp Contig6257       PREDICTED:GTP-bindingnuclearproteinRan-3-like[Brachypodiumdistachyon] 153 2.1125e-35
whem_1015_b01r 2012 3' Dormant seed with water absorption 603bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 293 2.16545e-77
whem_1044_e12f 2012 5' Dormant seed with water absorption 383bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 273 1.4078e-71
whem_1044_e12r 2012 3' Dormant seed with water absorption 621bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 299 4.24089e-79
whem_19087_j21f 2012 5' Dormant seed with water absorption 528bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 339 2.29235e-91
whem_19087_j21r 2012 3' Dormant seed with water absorption 611bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 337 1.34669e-90
whf_6045_h09f 2012 5' Spike at flowering date 445bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 167 1.1034e-39
whf_6044_h09r 2012 3' Spike at flowering date 445bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 188 6.01459e-46
whh_2034_b03f 2012 5' Spike at heading date 533bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 378 3.5646e-103
whh_2034_b03r 2012 3' Spike at heading date 486bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 227 1.17311e-57
whh_14019_e02r 2012 3' Spike at heading date 555bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 203 1.11141e-54
whh_12005_f13r 2012 3' Spike at heading date 458bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 171 9.76554e-41
whh_6093_k06f 2012 5' Spike at heading date 506bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 358 5.74219e-97
whh_6093_k06r 2012 3' Spike at heading date 504bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 242 3.42823e-62
whhg_11062_c15f 2012 5' Anther at meiosis of MT4B CS wheat 311bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 208 7.17957e-52
whhg_11062_c15r 2012 3' Anther at meiosis of MT4B CS wheat 727bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 377 2.27843e-102
whhg_4019_n06f 2012 5' Anther at meiosis of MT4B CS wheat 717bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 465 8.06887e-129
whhg_4019_n06r 2012 3' Anther at meiosis of MT4B CS wheat 743bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 413 2.32335e-113
whkp_14045_c10f 2012 5' Shoot grown under continuous light 557bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 393 1.22791e-107
whkp_14045_c10r 2012 3' Shoot grown under continuous light 698bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 402 6.13475e-110
whkp_12029_d05f 2012 5' Shoot grown under continuous light 757bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 465 9.18732e-129
whkp_12029_d05r 2012 3' Shoot grown under continuous light 738bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 430 1.80324e-118
whkp_1023_j06f 2012 5' Shoot grown under continuous light 756bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 465 9.10743e-129
whkp_1023_j06r 2012 3' Shoot grown under continuous light 738bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 383 2.52792e-104
whkv_20095_b21f 2012 5' Shoot grown with continuous light after cold treatment 720bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 463 3.09652e-128
whkv_20095_b21r 2012 3' Shoot grown with continuous light after cold treatment 753bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 396 5.14998e-108
whms_12008_i03f 2012 5' Seed DPA5 of DT3DL CS wheat 678bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 338 1.31726e-90
whms_12008_i03r 2012 3' Seed DPA5 of DT3DL CS wheat 578bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.92493e-61
whms_1023_j05f 2012 5' Seed DPA5 of DT3DL CS wheat 604bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 196 4.70516e-48
whms_1023_j05r 2012 3' Seed DPA5 of DT3DL CS wheat 203bp Contig6257            
whms_5088_j23f 2012 5' Seed DPA5 of DT3DL CS wheat 589bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 385 3.95599e-105
whms_5088_j23r 2012 3' Seed DPA5 of DT3DL CS wheat 518bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.38988e-61
whms_9070_l19f 2012 5' Seed DPA5 of DT3DL CS wheat 605bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 395 4.04615e-108
whms_9070_l19r 2012 3' Seed DPA5 of DT3DL CS wheat 528bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 242 3.81374e-62
whoh_8010_d19f 2012 5' Pistil at heading date 510bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 313 1.23035e-83
whoh_8010_d19r 2012 3' Pistil at heading date 201bp Contig6257            
whoh_2027_g08f 2012 5' Pistil at heading date 421bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 302 3.74127e-80
whoh_2027_g08r 2012 3' Pistil at heading date 447bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 233 2.1293e-59
whoh_16022_j20f 2012 5' Pistil at heading date 528bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 329 1.85762e-88
whoh_16022_j20r 2012 3' Pistil at heading date 500bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.30879e-61
whok_1061_c14f 2012 5' Seed DPA5 728bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 465 8.38842e-129
whok_1061_c14r 2012 3' Seed DPA5 747bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 391 9.54054e-107
whok_2061_c14r 2012 3' Seed DPA5 54bp Contig6257       unknown[Lotusjaponicus] 42 0.0362167
whok_17026_g07f 2012 5' Seed DPA5 565bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 384 1.00964e-104
whok_17026_g07r 2012 3' Seed DPA5 739bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 383 4.31198e-104
whok_2056_j16f 2012 5' Seed DPA5 703bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 463 2.95904e-128
whok_2056_j16r 2012 3' Seed DPA5 714bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 416 3.25856e-114
whok_15002_p03f 2012 5' Seed DPA5 701bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 463 2.95904e-128
whok_15002_p03r 2012 3' Seed DPA5 746bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 397 1.7387e-108
whpc_9048_a12f 2012 5' Anther at meiosis 709bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 465 8.02778e-129
whpc_9048_a12r 2012 3' Anther at meiosis 763bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 435 5.99153e-120
whpc_1040_j12f 2012 5' Anther at meiosis 442bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 130 1.45435e-28
whpc_1040_j12r 2012 3' Anther at meiosis 411bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 145 4.4116e-33
whr_13034_a09f 2012 5' Root 462bp Contig6257       PREDICTED:GTP-bindingnuclearproteinRan-3-like[Brachypodiumdistachyon] 305 3.39238e-81
whrd_14028_e07f 2012 5' Root of dessiccated seed 604bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 389 3.78708e-106
whrd_14028_e07r 2012 3' Root of dessiccated seed 522bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 242 3.64039e-62
whsc_17034_p11f 2012 5' Shoot grown with cold treatment 558bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 378 4.08765e-103
whsc_17034_p11r 2012 3' Shoot grown with cold treatment 582bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.95755e-61
whsd_1063_b13f 2012 5' Shoot grown with dessication 642bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 444 8.91289e-123
whsd_1063_b13r 2012 3' Shoot grown with dessication 597bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 332 5.35548e-89
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