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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 170
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_7091_g06r 2012 3' Crown of seedling 348bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 216 2.70286e-54
whf_5005_i13r 2012 3' Spike at flowering date 51bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 41 0.0991759
whkp_17080_a19r 2012 3' Shoot grown under continuous light 97bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 71 8.05431e-11
whkp_3090_h24r 2012 3' Shoot grown under continuous light 138bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 1.97898e-17
whkp_14037_l09r 2012 3' Shoot grown under continuous light 40bp Contig5761            
whkv_19079_b17r 2012 3' Shoot grown with continuous light after cold treatment 491bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 2.85668e-64
whkv_13043_f09r 2012 3' Shoot grown with continuous light after cold treatment 485bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 295 4.58114e-78
whkv_20052_n15f 2012 5' Shoot grown with continuous light after cold treatment 61bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 48 0.000594543
whms_19030_c07f 2012 5' Seed DPA5 of DT3DL CS wheat 621bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 7.33432e-79
whms_19030_c07r 2012 3' Seed DPA5 of DT3DL CS wheat 537bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 4.89184e-79
whms_2026_h08f 2012 5' Seed DPA5 of DT3DL CS wheat 637bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 295 8.51242e-78
whms_2026_h08r 2012 3' Seed DPA5 of DT3DL CS wheat 524bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 277 1.36543e-72
whsh_16018_b20f 2012 5' - 134bp Contig5761            
whsh_16018_b20r 2012 3' - 136bp Contig5761            
whsh_13009_c19f 2012 5' - 128bp Contig5761            
whsh_13009_c19r 2012 3' - 136bp Contig5761            
whsh_18010_d01f 2012 5' - 308bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 78 8.61156e-13
whsh_18010_d01r 2012 3' - 266bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 78 8.73229e-13
whsh_14090_d18f 2012 5' - 118bp Contig5761            
whsh_14090_d18r 2012 3' - 104bp Contig5761            
whsh_4028_h08r 2012 3' - 157bp Contig5761       unknown[Medicagotruncatula] 41 0.090961
whsh_7070_j23f 2012 5' - 475bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 6.99735e-55
whsh_7070_j23r 2012 3' - 437bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 4.81737e-56
whsh_16045_k09f 2012 5' - 181bp Contig5761            
whsh_16045_k09r 2012 3' - 102bp Contig5761            
whsh_12013_k13r 2012 3' - 99bp Contig5761            
whsh_16024_n14f 2012 5' - 511bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.28508e-48
whsh_16024_n14r 2012 3' - 448bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.28922e-48
whv_1614022_k07f 2012 5' Shoot grown under cold condition for 16days 604bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 6.7315e-79
whv_1614022_k07r 2012 3' Shoot grown under cold condition for 16days 539bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 290 1.33218e-76
whv_1612086_k23f 2012 5' Shoot grown under cold condition for 16days 586bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 6.15803e-79
whv_1612086_k23r 2012 3' Shoot grown under cold condition for 16days 517bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 289 3.32641e-76
whvd_2016_a04r 2012 3' Shoot grown with dessication 56bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 42 0.0293613
whvd_11014_d03f 2012 5' Shoot grown with dessication 425bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 284 1.04993e-74
whvd_11014_d03r 2012 3' Shoot grown with dessication 488bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 284 1.05134e-74
whvd_12078_d19f 2012 5' Shoot grown with dessication 351bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.38926e-34
whvd_12078_d19r 2012 3' Shoot grown with dessication 320bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 5.84239e-41
whvd_1091_f21f 2012 5' Shoot grown with dessication 574bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 285 5.12938e-75
whvd_1091_f21r 2012 3' Shoot grown with dessication 469bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 256 1.79123e-66
whvd_12026_g07f 2012 5' Shoot grown with dessication 593bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 295 7.14334e-78
whvd_12026_g07r 2012 3' Shoot grown with dessication 525bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 290 1.22116e-76
whvd_11006_k03f 2012 5' Shoot grown with dessication 615bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 7.13338e-79
whvd_11006_k03r 2012 3' Shoot grown with dessication 475bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 251 7.45871e-65
whvd_3085_k21f 2012 5' Shoot grown with dessication 703bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 195 1.15082e-47
whvd_3085_k21r 2012 3' Shoot grown with dessication 465bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 245 5.44121e-63
whvd_15019_n06f 2012 5' Shoot grown with dessication 600bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 6.63103e-79
whvd_15019_n06r 2012 3' Shoot grown with dessication 510bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 282 3.03749e-74
whvh_6014_d04f 2012 5' Shoot with heat shock treatment 618bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 296 2.74886e-78
whvh_6014_d04r 2012 3' Shoot with heat shock treatment 414bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.88901e-52
whvh_11025_g06f 2012 5' Shoot with heat shock treatment 449bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 4.10897e-79
whvh_11025_g06r 2012 3' Shoot with heat shock treatment 255bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 1.23274e-22
whvh_1007_i01r 2012 3' Shoot with heat shock treatment 375bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 1.29458e-56
whvh_15085_l22f 2012 5' Shoot with heat shock treatment 398bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 1.94076e-44
whvh_15085_l22r 2012 3' Shoot with heat shock treatment 363bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 8.22789e-48
whvh_14052_n16f 2012 5' Shoot with heat shock treatment 599bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 6.53056e-79
whvh_14052_n16r 2012 3' Shoot with heat shock treatment 567bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 5.65327e-79
whxe_9014_d04f 2012 5' Seedling, infected with leaf rust 615bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 7.13338e-79
whxe_9014_d04r 2012 3' Seedling, infected with leaf rust 578bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 5.95612e-79
whxe_24022_k07f 2012 5' Seedling, infected with leaf rust 563bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 5.57878e-79
whxe_24022_k07r 2012 3' Seedling, infected with leaf rust 484bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 285 3.62986e-75
whxe_32004_n04f 2012 5' Seedling, infected with leaf rust 522bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 284 1.09102e-74
whxe_33004_n04f 2012 5' Seedling, infected with leaf rust 94bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 70 2.34345e-10
whxe_32004_n04r 2012 3' Seedling, infected with leaf rust 491bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 4.10595e-79
whxe_33004_n04r 2012 3' Seedling, infected with leaf rust 168bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 107 1.74627e-21
whxf_20093_c21f 2012 5' Seedling, infected with leaf rust 558bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 5.47734e-79
whxf_20093_c21r 2012 3' Seedling, infected with leaf rust 413bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 256 1.76721e-66
whxf_20093_c22f 2012 5' Seedling, infected with leaf rust 309bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.18779e-54
whxf_8093_c22f 2012 5' Seedling, infected with leaf rust 418bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 1.70608e-40
whxf_20093_c22r 2012 3' Seedling, infected with leaf rust 279bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 7.22122e-44
whxf_8093_c22r 2012 3' Seedling, infected with leaf rust 397bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 5.47883e-47
whxf_39027_f06f 2012 5' Seedling, infected with leaf rust 583bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 296 2.30169e-78
whxf_26058_h16r 2012 3' Seedling, infected with leaf rust 50bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 37 1.4321
whxf_29023_i06r 2012 3' Seedling, infected with leaf rust 503bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 260 1.21649e-67
whxf_24055_j14f 2012 5' Seedling, infected with leaf rust 642bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 7.89914e-79
whxf_24055_j14r 2012 3' Seedling, infected with leaf rust 526bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 278 4.80207e-73
whxf_29022_k08f 2012 5' Seedling, infected with leaf rust 197bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 44 0.0140036
whxf_29022_k08r 2012 3' Seedling, infected with leaf rust 169bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 66 4.44721e-09
whxg_29048_a12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 82bp Contig5761            
whxg_21077_d17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 536bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 284 1.2209e-74
whxg_21077_d17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 586bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 292 4.48549e-77
whxg_6088_i23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 658bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 295 9.17573e-78
whxg_6088_i23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 531bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 280 1.32114e-73
whxg_37006_k04f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 478bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 293 1.31049e-77
whxg_37006_k04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 491bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 254 6.79937e-66
whxg_39006_l03f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 537bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 285 4.19618e-75
whxg_39006_l03r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 582bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 290 1.6495e-76
whxg_40083_n22f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 559bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 298 5.47734e-79
whxg_40083_n22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 511bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 285 3.58808e-75
whxg_18065_o17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 555bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 296 2.0043e-78
whxg_18065_o17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 600bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 292 3.58344e-77
whxg_34066_o20f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 327bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 184 8.61289e-45
whxg_34066_o20r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 499bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 274 6.29126e-72
whxg_31082_o24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 336bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 225 3.3332e-57
whxg_31082_o24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 286bp Contig5761       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 4.99264e-24
whxh_31042_g12r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 505bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 266 1.69747e-69
whxh_20058_g16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 572bp Contig5761       saltstress-responsiveprotein[Triticumaestivum] 284 1.46669e-74
whxh_38085_l21f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 112bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 82 6.12414e-14
whxh_38085_l21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 53bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 44 0.00953071
whxh_25050_o16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 158bp Contig5761            
whxh_26050_o16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 158bp Contig5761            
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