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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 29
First Previous 1-29 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_18028_e08f 2012 5' Dormant seed with water absorption after breaking 210bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform1[Brachypodiumdistachyon] 144 1.27736e-32
whei_18028_e08r 2012 3' Dormant seed with water absorption after breaking 660bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 4.5874e-93
whei_18076_e19r 2012 3' Dormant seed with water absorption after breaking 335bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 1.27143e-56
whhg_15014_d03f 2012 5' Anther at meiosis of MT4B CS wheat 722bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.46603e-93
whhg_15014_d03r 2012 3' Anther at meiosis of MT4B CS wheat 735bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.52296e-93
whhg_15029_d05f 2012 5' Anther at meiosis of MT4B CS wheat 679bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.27292e-93
whhg_15029_d05r 2012 3' Anther at meiosis of MT4B CS wheat 712bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 5.43492e-93
whpc_8008_i04f 2012 5' Anther at meiosis 784bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.74219e-93
whpc_8008_i04r 2012 3' Anther at meiosis 753bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.60836e-93
whr_3012_h19f 2012 5' Root 556bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 2.79677e-80
whr_3012_h19r 2012 3' Root 323bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform1[Brachypodiumdistachyon] 154 9.61658e-36
whsh_6001_a01f 2012 5' - 309bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform2[Brachypodiumdistachyon] 70 2.34515e-10
whsh_6001_a01r 2012 3' - 290bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform2[Brachypodiumdistachyon] 83 2.09493e-14
whsh_9070_j11r 2012 3' - 273bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform2[Brachypodiumdistachyon] 83 2.06384e-14
whsh_7038_j15f 2012 5' - 76bp Contig5733            
whv_167051_n14f 2012 5' Shoot grown under cold condition for 16days 171bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 7.06723e-23
whxf_8007_i02f 2012 5' Seedling, infected with leaf rust 663bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.23596e-93
whxf_8007_i02r 2012 3' Seedling, infected with leaf rust 518bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform1[Brachypodiumdistachyon] 301 5.0801e-80
whxh_37069_k17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 639bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.10661e-93
whxh_38069_k17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 631bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.08305e-93
whxh_37069_k17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 646bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 4.31435e-93
whxh_38069_k17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 611bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 340 1.59079e-91
HX046103 whxm_4056_j15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 360bp Contig5733       PREDICTED:N-alpha-acetyltransferase50-likeisoform1[Brachypodiumdistachyon] 195 3.72232e-48
HX074680 whxo_10046_d12f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 640bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.10661e-93
HX074701 whxo_10046_d12r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 631bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.07787e-93
HX151969 whxs_18090_g24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 683bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.30152e-93
HX151991 whxs_18090_g24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 656bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.19284e-93
whxx_5063_b13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 702bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.38734e-93
whxx_5063_b13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 677bp Contig5733       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.27292e-93
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