Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 104
First Previous 1-100 101-104 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_4011_f01r 2012 3' Dormant seed with water absorption after breaking 470bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 188 4.58688e-46
whf_4044_h21f 2012 5' Spike at flowering date 515bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 312 2.15112e-83
whf_4044_h21r 2012 3' Spike at flowering date 427bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 125 4.75886e-27
whf_12069_i11f 2012 5' Spike at flowering date 303bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 203 2.33517e-50
whf_12069_i11r 2012 3' Spike at flowering date 253bp Contig5683       hypotheticalproteinSORBIDRAFT_04g001580[Sorghumbicolor] 40 0.197793
whhg_13077_d17r 2012 3' Anther at meiosis of MT4B CS wheat 118bp Contig5683       PREDICTED:aquaporinTIP1-1-likeisoform1[Brachypodiumdistachyon] 89 3.81287e-16
whkp_11058_h16f 2012 5' Shoot grown under continuous light 620bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 366 2.16295e-99
whkp_11058_h16r 2012 3' Shoot grown under continuous light 560bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 271 1.22306e-70
whok_20072_i20f 2012 5' Seed DPA5 431bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 283 1.77585e-74
whok_20072_i20r 2012 3' Seed DPA5 592bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 263 2.26728e-68
whr_18087_j06f 2012 5' Root 500bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 324 5.27677e-87
whr_18087_j06r 2012 3' Root 270bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 45 0.00622847
whrd_10015_a02f 2012 5' Root of dessiccated seed 454bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 233 1.60925e-59
whrd_10015_a02r 2012 3' Root of dessiccated seed 550bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.36866e-62
whrd_3047_a09r 2012 3' Root of dessiccated seed 312bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 76 2.49636e-12
whrd_3067_m17f 2012 5' Root of dessiccated seed 314bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 93 2.56783e-17
whrd_3067_m17r 2012 3' Root of dessiccated seed 392bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 150 1.77588e-34
whsd_6013_c02f 2012 5' Shoot grown with dessication 498bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 202 3.9681e-50
whsd_6013_c02r 2012 3' Shoot grown with dessication 482bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 225 4.34352e-57
whsd_7003_n02f 2012 5' Shoot grown with dessication 553bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 80 2.9484e-13
whsd_7003_n02r 2012 3' Shoot grown with dessication 638bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 103 3.63494e-20
whv3_17037_k09f 2012 5' Shoot grown under cold condition for 3days 304bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 158 8.58331e-37
whv3_18037_k09r 2012 3' Shoot grown under cold condition for 3days 141bp Contig5683            
whvd_18033_o10f 2012 5' Shoot grown with dessication 441bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 135 4.52099e-30
whvd_18033_o10r 2012 3' Shoot grown with dessication 374bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 128 9.66782e-28
whxa_17029_d05f 2012 5' Root 390bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 252 4.35132e-65
whxa_22041_g10r 2012 3' Root 510bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 217 9.23131e-55
whxb_25057_h13f 2012 5' Root 420bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 67 1.55098e-09
whxb_25057_h13r 2012 3' Root 368bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 87 1.84281e-15
whxb_18086_l24f 2012 5' Root 439bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 275 4.77457e-72
whxb_18086_l24r 2012 3' Root 206bp Contig5683       hypotheticalproteinOsJ_21390[OryzasativaJaponicaGroup] 39 0.446062
whxb_38001_p01r 2012 3' Root 507bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 234 7.33159e-60
whxb_28049_p14f 2012 5' Root 375bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 114 1.44466e-23
whxb_28049_p14r 2012 3' Root 348bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 139 3.21508e-31
whxc_34061_c14f 2012 5' Root, treated at 50 microM Al for 6h 333bp Contig5683       hypotheticalproteinSORBIDRAFT_04g001580[Sorghumbicolor] 38 0.760455
whxc_34061_c14r 2012 3' Root, treated at 50 microM Al for 6h 301bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 49 0.000431531
whxc_22017_o05f 2012 5' Root, treated at 50 microM Al for 6h 558bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 358 5.82496e-97
whxc_22017_o05r 2012 3' Root, treated at 50 microM Al for 6h 545bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.23656e-62
whxd_10031_b06r 2012 3' Root, treated at 50 microM Al for 6h 352bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 111 1.21987e-22
whxd_39058_g16f 2012 5' Root, treated at 50 microM Al for 6h 635bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 254 2.14652e-65
whxd_39058_g16r 2012 3' Root, treated at 50 microM Al for 6h 541bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.18554e-62
whxd_17035_n09f 2012 5' Root, treated at 50 microM Al for 6h 233bp Contig5683            
whxd_17035_n09r 2012 3' Root, treated at 50 microM Al for 6h 206bp Contig5683       hypotheticalproteinOsJ_21390[OryzasativaJaponicaGroup] 39 0.446062
whxd_16034_o11r 2012 3' Root, treated at 50 microM Al for 6h 553bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.43471e-62
whxe_29092_e23f 2012 5' Seedling, infected with leaf rust 586bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 354 7.35929e-96
whxg_13059_f14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 418bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 108 6.09622e-22
whxg_13059_f14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 353bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 124 1.38712e-26
whxg_36010_h03r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 45bp Contig5683       PREDICTED:aquaporinTIP1-1-likeisoform1[Brachypodiumdistachyon] 42 0.0319559
whxg_15089_h21f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 576bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 354 9.14646e-96
whxg_15089_h21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 552bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 240 1.28009e-61
whxg_36090_h24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 392bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 249 2.80906e-64
whxg_36090_h24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 347bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 108 6.07746e-22
whxg_31023_j05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 546bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 236 2.31947e-60
HX004152 whxi_8058_g16f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 543bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 313 1.50009e-83
HX004168 whxi_8058_g16r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 220bp Contig5683       hypotheticalproteinPHYSODRAFT_512073[Phytophthorasojae] 37 1.32644
HX026302 whxk_17087_j21f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 53bp Contig5683       aquaporin,partial[Triticumaestivum] 36 1.98727
HX058652 whxn_27026_g08f 2012 5' Leaves, plant was grown at constant 23Ž 628bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 409 3.03103e-112
HX058673 whxn_27026_g08r 2012 3' Leaves, plant was grown at constant 23Ž 541bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.18554e-62
HX077833 whxo_16041_h10r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 446bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 176 3.089e-42
HX091193 whxp_22060_e16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 625bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 400 1.81434e-109
HX091220 whxp_22060_e16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 546bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 240 1.63907e-61
HX092182 whxp_22043_f09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 590bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 358 5.17867e-97
HX092183 whxp_23043_f09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 543bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 335 4.81446e-90
HX092213 whxp_22043_f09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 546bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.30261e-62
HX092214 whxp_23043_f09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 54bp Contig5683       aquaporin,partial[Triticumaestivum] 38 0.683017
HX114710 whxq_24009_h02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 627bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 396 2.65531e-108
HX114733 whxq_24009_h02r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 344bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 129 3.33985e-28
HX120729 whxq_6036_m11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 322bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 63 2.23246e-08
HX120730 whxq_7036_m11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 320bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 61 1.45244e-07
HX120750 whxq_6036_m11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 274bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 82 6.00484e-14
HX120751 whxq_7036_m11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 258bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 82 6.11099e-14
HX125098 whxr_1047_a10f 2012 5' Roots, 18 day old plants were grown hydroponically 732bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 465 8.46831e-129
HX125119 whxr_1047_a10r 2012 3' Roots, 18 day old plants were grown hydroponically 660bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 310 2.78954e-82
HX126027 whxr_9031_b05f 2012 5' Roots, 18 day old plants were grown hydroponically 784bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 499 4.64084e-139
HX126051 whxr_9031_b05r 2012 3' Roots, 18 day old plants were grown hydroponically 778bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 235 1.23968e-59
HX130994 whxr_17043_f09f 2012 5' Roots, 18 day old plants were grown hydroponically 804bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 365 2.38166e-132
HX131018 whxr_17043_f09r 2012 3' Roots, 18 day old plants were grown hydroponically 714bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 368 1.3424e-99
HX132945 whxr_14090_g24f 2012 5' Roots, 18 day old plants were grown hydroponically 522bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 187 1.81511e-45
HX132970 whxr_14090_g24r 2012 3' Roots, 18 day old plants were grown hydroponically 517bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 214 1.35993e-53
HX138374 whxr_19038_l12f 2012 5' Roots, 18 day old plants were grown hydroponically 776bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 490 2.76934e-136
HX138400 whxr_19038_l12r 2012 3' Roots, 18 day old plants were grown hydroponically 672bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 323 2.51303e-86
HX139756 whxr_5052_m15f 2012 5' Roots, 18 day old plants were grown hydroponically 758bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 479 4.70754e-133
HX139780 whxr_5052_m15r 2012 3' Roots, 18 day old plants were grown hydroponically 674bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 323 2.54191e-86
HX141061 whxr_11067_n17r 2012 3' Roots, 18 day old plants were grown hydroponically 258bp Contig5683       hypotheticalproteinSORBIDRAFT_04g001580[Sorghumbicolor] 38 0.774837
HX152116 whxs_14010_h03f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 759bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 482 5.56084e-134
HX152141 whxs_14010_h03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 651bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 307 1.33499e-81
HX160306 whxs_15068_n19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 750bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 349 4.23254e-94
HX160331 whxs_15068_n19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 634bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 320 1.84283e-85
HX170898 whxt_5026_g08f 2012 5' Roots, 18 day old plants were grown hydroponically 733bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 465 8.5482e-129
HX170925 whxt_5026_g08r 2012 3' Roots, 18 day old plants were grown hydroponically 674bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 323 2.54191e-86
HX173316 whxt_8024_i07f 2012 5' Roots, 18 day old plants were grown hydroponically 732bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 465 8.46831e-129
HX173342 whxt_8024_i07r 2012 3' Roots, 18 day old plants were grown hydroponically 682bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 323 2.59968e-86
HX174075 whxt_21087_i22f 2012 5' Roots, 18 day old plants were grown hydroponically 625bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 233 2.93724e-59
HX174103 whxt_21087_i22r 2012 3' Roots, 18 day old plants were grown hydroponically 584bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 260 2.42719e-67
HX174835 whxt_12055_j13f 2012 5' Roots, 18 day old plants were grown hydroponically 733bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 465 8.5482e-129
HX174863 whxt_12055_j13r 2012 3' Roots, 18 day old plants were grown hydroponically 682bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 323 2.59968e-86
HX181022 whxt_30049_o14f 2012 5' Roots, 18 day old plants were grown hydroponically 757bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 479 4.6666e-133
HX181048 whxt_30049_o14r 2012 3' Roots, 18 day old plants were grown hydroponically 641bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 326 4.5617e-87
HX190779 whxu_12074_g19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 598bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 222 7.80538e-56
HX190803 whxu_12074_g19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 551bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 262 5.3657e-68
page-top