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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 51
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkp_14078_c20f 2012 5' Shoot grown under continuous light 63bp Contig5630       putativeleucinezipperprotein[Triticumaestivum] 51 7.37428e-05
whkp_3033_p10f 2012 5' Shoot grown under continuous light 265bp Contig5630            
whkp_3033_p10r 2012 3' Shoot grown under continuous light 211bp Contig5630       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 36 4.89922
whkp_10065_p18f 2012 5' Shoot grown under continuous light 120bp Contig5630            
whkp_10065_p18r 2012 3' Shoot grown under continuous light 94bp Contig5630            
whkv_7061_d13f 2012 5' Shoot grown with continuous light after cold treatment 657bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 458 8.18441e-127
whkv_7061_d13r 2012 3' Shoot grown with continuous light after cold treatment 724bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 400 3.28242e-109
whkv_12086_k24r 2012 3' Shoot grown with continuous light after cold treatment 129bp Contig5630            
whsd_19021_k06f 2012 5' Shoot grown with dessication 347bp Contig5630            
whsd_19021_k06r 2012 3' Shoot grown with dessication 311bp Contig5630       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 38 0.983944
whsh_9008_n19r 2012 3' - 385bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 122 5.22099e-26
whsh_9008_n19f 2012 5' - 399bp Contig5630       putativeleucinezipperprotein[Triticumaestivum] 106 3.93779e-21
whsh_12047_o15r 2012 3' - 232bp Contig5630            
whv_162006_k04f 2012 5' Shoot grown under cold condition for 16days 747bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 376 3.17601e-102
whv_162006_k04r 2012 3' Shoot grown under cold condition for 16days 696bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 294 2.32842e-77
whv3_9077_d17f 2012 5' Shoot grown under cold condition for 3days 744bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 375 9.24077e-102
whv3_9077_d17r 2012 3' Shoot grown under cold condition for 3days 721bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 314 2.34599e-83
whvd_17016_a03f 2012 5' Shoot grown with dessication 673bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 428 1.31737e-120
whvd_17016_a03r 2012 3' Shoot grown with dessication 620bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 235 9.8223e-60
whvd_17016_a04f 2012 5' Shoot grown with dessication 55bp Contig5630       unknown[Lotusjaponicus] 41 0.0617763
whvd_17016_a04r 2012 3' Shoot grown with dessication 567bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 205 8.50668e-51
whvd_16064_b15f 2012 5' Shoot grown with dessication 717bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 453 7.76701e-131
whvd_16064_b15r 2012 3' Shoot grown with dessication 684bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 289 5.55399e-76
whvd_16064_b16f 2012 5' Shoot grown with dessication 684bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 435 5.58532e-125
whvd_16064_b16r 2012 3' Shoot grown with dessication 659bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 273 2.89343e-71
whvd_15010_g03f 2012 5' Shoot grown with dessication 768bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 392 7.6624e-107
whvd_15010_g03r 2012 3' Shoot grown with dessication 631bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 289 4.5496e-76
whvd_1037_k09r 2012 3' Shoot grown with dessication 689bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 312 8.08834e-83
whvh_13078_c19f 2012 5' Shoot with heat shock treatment 707bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 484 1.2659e-134
whvh_13078_c19r 2012 3' Shoot with heat shock treatment 757bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 345 1.06096e-92
whxh_7025_h06f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 547bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 384 9.17857e-105
whxh_7025_h06r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 622bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 242 4.77607e-62
HX006689 whxi_1054_k15f 2012 5' Two-week old seedlingsi22 16L-8Dj 388bp Contig5630       hypotheticalproteinOsJ_01305[OryzasativaJaponicaGroup] 240 4.20641e-63
HX006703 whxi_1054_k15r 2012 3' Two-week old seedlingsi22 16L-8Dj 414bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 179 3.57078e-43
HX009917 whxi_6081_p21f 2012 5' Two-week old seedlingsi22 16L-8Dj 64bp Contig5630       MgprotoporphyrinIXmonomethylesteroxidativecyclase(aerobic)[CrocosphaerawatsoniiWH0003] 50 0.000214559
HX009930 whxi_6081_p21r 2012 3' Two-week old seedlingsi22 16L-8Dj 287bp Contig5630            
HX068561 whxn_23051_n14f 2012 5' Leaves, plant was grown at constant 23 613bp Contig5630       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 422 5.42957e-116
HX068589 whxn_23051_n14r 2012 3' Leaves, plant was grown at constant 23 585bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 250 1.49667e-64
HX116216 whxq_8039_i10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 625bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 332 4.64607e-89
HX116235 whxq_8039_i10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 527bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 189 3.83147e-46
HX120223 whxq_18003_m01f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 606bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 425 6.32081e-117
HX120224 whxq_19003_m01f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 615bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 428 7.68615e-118
HX120249 whxq_18003_m01r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 566bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 209 3.47012e-52
HX120250 whxq_19003_m01r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 537bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 186 3.5384e-45
HX121701 whxq_6020_n08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 433bp Contig5630       putativeleucinezipperprotein[Triticumaestivum] 104 1.12573e-20
HX121723 whxq_6020_n08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 412bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 123 1.78782e-26
HX173995 whxt_15072_i20r 2012 3' Roots, 18 day old plants were grown hydroponically 786bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 367 2.14202e-99
HX180689 whxt_17018_o08f 2012 5' Roots, 18 day old plants were grown hydroponically 694bp Contig5630       leucinezipperproteinzip1[Triticumaestivum] 454 1.33201e-125
HX180715 whxt_17018_o08r 2012 3' Roots, 18 day old plants were grown hydroponically 741bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 329 4.41225e-88
whxv_5088_j24f 2012 5' Leaves, plant was grown at constant 23 733bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 502 6.31014e-140
whxv_5088_j24r 2012 3' Leaves, plant was grown at constant 23 761bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 329 4.65291e-88
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