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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 29
First Previous 1-29 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_23053_f16f 2012 5' Spike at heading date 384bp Contig5449       unknown[Medicagotruncatula] 245 5.36205e-63
whms_15065_o18f 2012 5' Seed DPA5 of DT3DL CS wheat 543bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 322 3.22936e-86
whpc_15057_h14f 2012 5' Anther at meiosis 564bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 334 9.1743e-90
whrd_6027_f05f 2012 5' Root of dessiccated seed 171bp Contig5449       unknown[Medicagotruncatula] 107 1.32858e-21
whsd_8016_a03f 2012 5' Shoot grown with dessication 518bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 318 5.2449e-85
whsd_10009_h01f 2012 5' Shoot grown with dessication 384bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 234 9.4649e-60
whxd_9090_h23f 2012 5' Root, treated at 50 microM Al for 6h 351bp Contig5449       unknown[Medicagotruncatula] 220 1.09314e-55
whxd_6053_k14f 2012 5' Root, treated at 50 microM Al for 6h 331bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 202 3.04474e-50
whxf_4071_j17f 2012 5' Seedling, infected with leaf rust 333bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 206 2.10059e-51
HX001829 whxi_8094_c24f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 195bp Contig5449       unknown[Medicagotruncatula] 129 4.3371e-28
HX003928 whxi_11026_g08f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 326bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 199 3.39178e-49
HX011999 whxj_14045_d09f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 341bp Contig5449       unknown[Medicagotruncatula] 218 5.30129e-55
HX032146 whxl_9014_d03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 308bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 200 1.9624e-49
HX033201 whxl_4075_e18f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 277bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 171 7.47279e-41
HX039036 whxl_11084_n23f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 274bp Contig5449       unknown[Medicagotruncatula] 177 1.37156e-42
HX071020 whxn_26033_p09f 2012 5' Leaves, plant was grown at constant 23Ž 564bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 354 8.72275e-96
HX073031 whxo_13048_b11f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 544bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 339 2.55285e-91
HX081566 whxo_1003_m02f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 607bp Contig5449       polyubiquitin[Arabidopsislyratasubsp.lyrata] 390 1.3016e-106
HX095718 whxp_21089_h22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 524bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 328 3.95442e-88
HX098581 whxp_20088_j24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 487bp Contig5449       unknown[Medicagotruncatula] 316 1.91156e-84
HX099479 whxp_18054_k16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 273bp Contig5449       unknown[Medicagotruncatula] 176 2.33126e-42
HX099526 whxp_17069_k17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 578bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 347 1.11808e-93
HX100041 whxp_18005_l02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 457bp Contig5449       unknown[Medicagotruncatula] 291 8.49351e-77
HX124807 whxr_24016_a04f 2012 5' Roots, 18 day old plants were grown hydroponically 773bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 468 8.55684e-130
HX141239 whxr_23083_n21f 2012 5' Roots, 18 day old plants were grown hydroponically 790bp Contig5449       MultidrugresistanceproteinABCtransporterfamily[Medicagotruncatula] 494 1.99774e-137
HX160465 whxs_17083_n22f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 622bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 379 4.21148e-103
HX166286 whxt_5062_c15f 2012 5' Roots, 18 day old plants were grown hydroponically 736bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 461 1.24589e-127
HX170123 whxt_28075_f17f 2012 5' Roots, 18 day old plants were grown hydroponically 690bp Contig5449       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 445 7.99509e-123
HX174795 whxt_20040_j12f 2012 5' Roots, 18 day old plants were grown hydroponically 707bp Contig5449       polyubiquitin,partial[Wolffiaaustraliana] 438 6.09932e-121
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