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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 157
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ208762 wh10l06 2002 5' Spike at meiosis 625bp Contig16272 Contig16272 P23993 GO:0009522 photosystem I alpha tubulin-2A [Triticum aestivum] 834 1.10812e-87
BJ209081 wh12i16 2002 5' Spike at meiosis 496bp Contig16272 Contig16272 Q41898 GO:0015078 hydrogen ion transporter activity alpha tubulin-2A [Triticum aestivum] 674 2.10242e-69
BJ209373 wh13o21 2002 5' Spike at meiosis 557bp Contig16272 Contig16272 Q03033 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 754 1.58606e-78
BJ210043 wh16o18 2002 5' Spike at meiosis 568bp Contig16272 Contig16272 P28740 GO:0005524 ATP binding alpha tubulin-2A [Triticum aestivum] 961 1.64761e-102
BJ212514 wh17m21 2002 5' Spike at meiosis 649bp Contig16272 Contig16272 Q43207 GO:0003755 peptidyl-prolyl cis-trans isomerase activity alpha tubulin-2A [Triticum aestivum] 1087 5.55178e-117
BJ212717 wh18m12 2002 5' Spike at meiosis 602bp Contig16272 Contig16272 P48768 GO:0016021 integral to membrane alpha tubulin-2A [Triticum aestivum] 779 2.42052e-81
BJ213792 wh24e10 2002 5' Spike at meiosis 311bp Contig16272 Contig16272 Q40635 GO:0016787 hydrolase activity unknown [Populus trichocarpa] 387 3.7361e-36
BJ214014 wh25g21 2002 5' Spike at meiosis 569bp Contig16272 Contig16272 P05621 GO:0000786 nucleosome alpha tubulin-2A [Triticum aestivum] 886 8.19598e-94
BJ211292 wh30a05 2002 5' Spike at meiosis 212bp Contig16272 Contig16272 P26517 GO:0016491 oxidoreductase activity PREDICTED: hypothetical protein [Gallus gallus] 197 4.02874e-14
BJ211491 wh30p13 2002 5' Spike at meiosis 399bp Contig16272 Contig16272 Q60987 GO:0003677 DNA binding alpha tubulin-2A [Triticum aestivum] 559 4.35472e-56
BJ211939 wh34b19 2002 5' Spike at meiosis 605bp Contig16272 Contig16272 Q42829 GO:0008295 spermidine biosynthesis alpha tubulin-2A [Triticum aestivum] 775 7.14045e-81
BJ207440 wh3m12 2002 5' Spike at meiosis 624bp Contig16272 Contig16272 P33126 GO:0003773 heat shock protein activity alpha tubulin-2A [Triticum aestivum] 834 1.11324e-87
BJ207657 wh4m12 2002 5' Spike at meiosis 419bp Contig16272 Contig16272 P25076 GO:0005746 mitochondrial electron transport chain alpha tubulin-2A [Triticum aestivum] 599 9.73391e-61
BJ207774 wh5e23 2002 5' Spike at meiosis 397bp Contig16272 Contig16272 P22739 GO:0005216 ion channel activity alpha tubulin-2A [Triticum aestivum] 579 2.08847e-58
BJ207884 wh5m23 2002 5' Spike at meiosis 128bp Contig16272 Contig16272 Q24255 GO:0007275 development alpha tubulin-2A [Triticum aestivum] 126 6.9438e-06
BJ208346 wh7n18 2002 5' Spike at meiosis 548bp Contig16272 Contig16272 P21569 GO:0003755 peptidyl-prolyl cis-trans isomerase activity alpha tubulin-2A [Triticum aestivum] 759 3.96161e-79
BJ208444 wh8e20 2002 5' Spike at meiosis 350bp Contig16272 Contig16272 Q96558 Q96460 GO:0016491 GO:0005525 oxidoreductase activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 375 1.28627e-41
BJ208478 wh8g21 2002 5' Spike at meiosis 630bp Contig16272 Contig16272 Q94526 Q96460 GO:0016021 GO:0005525 integral to membrane ,  GTP binding alpha tubulin-2A [Triticum aestivum] 839 2.95303e-88
BJ210122 wh9f11 2002 5' Spike at meiosis 530bp Contig16272 Contig16272 Q9M291 Q9ZRB7 GO:0006810 GO:0005525 transport ,  GTP binding alpha tubulin-2A [Triticum aestivum] 755 1.05452e-78
BJ215928 rwh10l06 2002 3' Spike at meiosis 703bp Contig16272 Contig16272 Q9Y3C3 Q9ZRB7 GO:0005794 GO:0005525 Golgi apparatus ,  GTP binding alpha tubulin-2A [Triticum aestivum] 899 4.21505e-95
BJ216493 rwh12i16 2002 3' Spike at meiosis 332bp Contig16272 Contig16272 O43896 P09643 GO:0003774 GO:0005525 motor activity ,  GTP binding hypothetical protein [Giardia lamblia ATCC 50803] 120 3.44345e-05
BJ216802 rwh13o21 2002 3' Spike at meiosis 662bp Contig16272 Contig16272 Q42843 Q9ZRB7 GO:0015995 GO:0005525 chlorophyll biosynthesis ,  GTP binding alpha tubulin-2A [Triticum aestivum] 786 4.69808e-82
BJ217451 rwh16o18 2002 3' Spike at meiosis 581bp Contig16272 Contig16272 O95544 Q9ZRB7 GO:0016740 GO:0005525 transferase activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 690 4.65856e-71
BJ219975 rwh17m21 2002 3' Spike at meiosis 691bp Contig16272 Contig16272 P34758 Q9ZRB7 GO:0008565 GO:0005525 protein transporter activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 820 5.80736e-86
BJ220187 rwh18m12 2002 3' Spike at meiosis 655bp Contig16272 Contig16272 Q9AXQ6 Q9ZRB7 GO:0003743 GO:0005525 translation initiation factor activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 778 3.88975e-81
BJ221296 rwh24e10 2002 3' Spike at meiosis 328bp Contig16272 Contig16272 Q9XHE4 P11237 GO:0003735 GO:0005525 structural constituent of ribosome ,  GTP binding unknown [Zea mays] 226 1.7669e-17
BJ221492 rwh25g21 2002 3' Spike at meiosis 623bp Contig16272 Contig16272 Q9LST7 Q9ZRB7 GO:0005829 GO:0005525 cytosol ,  GTP binding alpha tubulin-2A [Triticum aestivum] 724 6.33604e-75
BJ217640 rwh27n16 2002 3' Spike at meiosis 372bp Contig16272 Contig16272 Q64264 Q9ZRB7 GO:0007186 GO:0005525 G-protein coupled receptor protein signaling pathway ,  GTP binding unknown [Zea mays] 293 2.95074e-25
BJ218930 rwh30p13 2002 3' Spike at meiosis 570bp Contig16272 Contig16272 Q9X0I1 Q9ZRB7 GO:0000287 GO:0005525 magnesium ion binding ,  GTP binding alpha tubulin-2A [Triticum aestivum] 583 1.13608e-58
BJ219392 rwh34b19 2002 3' Spike at meiosis 567bp Contig16272 Contig16272 O43670 Q9ZRB7 GO:0003677 GO:0005525 DNA binding ,  GTP binding alpha tubulin-2A [Triticum aestivum] 662 7.60017e-68
BJ214718 rwh3m12 2002 3' Spike at meiosis 651bp Contig16272 Contig16272 P25032 Q9ZRB7 GO:0003677 GO:0005525 DNA binding ,  GTP binding alpha tubulin-2A [Triticum aestivum] 770 3.21887e-80
BJ215056 rwh5e23 2002 3' Spike at meiosis 372bp Contig16272 Contig16272 P29616 P11237 GO:0003779 GO:0005525 actin binding ,  GTP binding unknown [Zea mays] 241 3.25567e-19
BJ215621 rwh7n18 2002 3' Spike at meiosis 567bp Contig16272 Contig16272 Q04561 Q9ZRB7 GO:0003968 GO:0005525 RNA-directed RNA polymerase activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 617 1.27624e-62
BJ215716 rwh8e20 2002 3' Spike at meiosis 324bp Contig16272 Contig16272 P52434 Q9ZRB7 GO:0016740 GO:0005525 transferase activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 580 1.58555e-58
BJ215751 rwh8g21 2002 3' Spike at meiosis 699bp Contig16272 Contig16272 P59258 Q9ZRB7 GO:0005634 GO:0005525 nucleus ,  GTP binding alpha tubulin-2A [Triticum aestivum] 825 1.57456e-86
BJ215992 rwh9f07 2002 3' Spike at meiosis 520bp Contig16272 Contig16272 Q9XPS4 Q9ZRB7 GO:0009579 GO:0005525 thylakoid ,  GTP binding alpha tubulin-2A [Triticum aestivum] 539 1.08196e-53
BJ215995 rwh9f11 2002 3' Spike at meiosis 707bp Contig16272 Contig16272 Q9RWR5 Q9ZRB7 GO:0003899 GO:0005525 DNA-directed RNA polymerase activity ,  GTP binding alpha tubulin-2A [Triticum aestivum] 906 6.56542e-96
BJ293494 whsl16k22 2002 5' Seed DPA30 456bp Contig16272 Contig16272 O34598 Q9ZRB7 GO:0006144 GO:0005525 purine base metabolism ,  GTP binding alpha tubulin-2A [Triticum aestivum] 680 3.9955e-70
BJ290389 whsl18g01 2002 5' Seed DPA30 222bp Contig16272 Contig16272 P59258 Q16983 Q16983 Q16983 GO:0003677 GO:0004930 GO:0007186 GO:0016021 DNA binding ,  G-protein coupled receptor activity ,  G-protein coupled receptor protein signaling pathway ,  integral to membrane PREDICTED: similar to Immunoglobulin-binding protein 1 (CD79a-binding protein 1) (B cell signal transduction molecule alpha 4) (Alpha 4 protein) isoform 1 [Canis familiaris] 78 2.60841
BJ296934 rwhsl18g01 2002 3' Seed DPA30 161bp Contig16272 Contig16272 Q9VEB3 GO:0005634 nucleus      
BJ222340 whdl12p01 2002 5' Crown of seedling 591bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 760 3.7034e-79
BJ222575 whdl14e04 2002 5' Crown of seedling 529bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 508 4.61679e-50
BJ226655 whdl18f23 2002 5' Crown of seedling 618bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 834 1.09915e-87
BJ224719 whdl19p23 2002 5' Crown of seedling 669bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 782 1.37557e-81
BJ225437 whdl22b14 2002 5' Crown of seedling 604bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 794 4.47249e-83
BJ225976 whdl24j21 2002 5' Crown of seedling 408bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding unknown [Zea mays] 258 3.44057e-21
BJ226248 whdl25l01 2002 5' Crown of seedling 627bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 827 7.27356e-87
BJ226433 whdl26h15 2002 5' Crown of seedling 680bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 974 7.82157e-104
BJ223598 whdl5m11 2002 5' Crown of seedling 458bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 755 7.99732e-79
BJ227286 rwhdl12p01 2002 3' Crown of seedling 501bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 539 9.71245e-54
BJ227399 rwhdl13k19 2002 3' Crown of seedling 520bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 576 5.54393e-58
BJ227486 rwhdl14e04 2002 3' Crown of seedling 521bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 571 2.15151e-57
BJ230272 rwhdl22b14 2002 3' Crown of seedling 620bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 720 1.82017e-74
BJ230888 rwhdl24j21 2002 3' Crown of seedling 368bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding unknown [Zea mays] 258 3.38929e-21
BJ231026 rwhdl25c19 2002 3' Crown of seedling 605bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 660 1.54432e-67
BJ231157 rwhdl25l01 2002 3' Crown of seedling 582bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 660 2.67384e-70
BJ231347 rwhdl26h15 2002 3' Crown of seedling 770bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 928 3.96195e-99
BJ228323 rwhdl5m11 2002 3' Crown of seedling 735bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 579 1.38366e-98
BJ229085 rwhdl9l13 2002 3' Crown of seedling 611bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 706 7.35311e-73
BJ231986 whe10h02 2002 5' Seed DPA10 606bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 794 4.53376e-83
BJ232088 whe11a08 2002 5' Seed DPA10 514bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 759 3.269e-79
BJ237089 whe24g04 2002 5' Seed DPA10 488bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 724 3.19981e-75
BJ233570 whe6e18 2002 5' Seed DPA10 566bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 759 4.29566e-79
BJ237596 rwhe10h02 2002 3' Seed DPA10 688bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 829 5.19948e-87
BJ237736 rwhe11a08 2002 3' Seed DPA10 754bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 920 1.76282e-97
BJ242634 rwhe24g04 2002 3' Seed DPA10 235bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding      
BJ239428 rwhe6e18 2002 3' Seed DPA10 696bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 833 1.84174e-87
BJ244541 whf15e22 2002 5' Spike at flowering date 649bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 860 1.17925e-90
BJ250363 rwhf15e22 2002 3' Spike at flowering date 683bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 825 1.49738e-86
BJ253106 rwhf27f20 2002 3' Spike at flowering date 514bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 498 5.88233e-49
BJ257756 whh13f05 2002 5' Spike at heading date 641bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 839 3.10068e-88
BJ259102 whh14o22 2002 5' Spike at heading date 645bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 860 1.15215e-90
BJ257064 whh19k22 2002 5' Spike at heading date 698bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 1208 6.10622e-131
BJ257303 whh20n07 2002 5' Spike at heading date 676bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 885 1.61766e-93
BJ257312 whh20o07 2002 5' Spike at heading date 419bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 628 4.22226e-64
BJ260006 whh23b15 2002 5' Spike at heading date 624bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 834 1.10812e-87
BJ260744 whh26k11 2002 5' Spike at heading date 634bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 623 2.28342e-80
BJ260810 whh26p21 2002 5' Spike at heading date 452bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 676 1.16753e-69
BJ258208 whh6g06 2002 5' Spike at heading date 166bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 205 4.8007e-15
BJ263176 rwhh13f05 2002 3' Spike at heading date 706bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 837 6.58067e-88
BJ264577 rwhh14o22 2002 3' Spike at heading date 607bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 702 2.1109e-72
BJ262096 rwhh17b22 2002 3' Spike at heading date 591bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 603 2.26787e-63
BJ262635 rwhh19k22 2002 3' Spike at heading date 658bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 660 3.55332e-70
BJ262890 rwhh20n07 2002 3' Spike at heading date 698bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 606 3.90536e-61
BJ262898 rwhh20o07 2002 3' Spike at heading date 681bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 554 1.04904e-70
BJ265723 rwhh23b15 2002 3' Spike at heading date 682bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 820 5.63137e-86
BJ266434 rwhh26k11 2002 3' Spike at heading date 579bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 706 6.50048e-73
BJ266499 rwhh26p21 2002 3' Spike at heading date 624bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 724 6.30691e-75
BJ263812 rwhh6g06 2002 3' Spike at heading date 689bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 833 1.80527e-87
BJ267487 whoh11m10 2002 5' Pistil at heading date 476bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 765 5.56464e-80
BJ268041 whoh14l10 2002 5' Pistil at heading date 611bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 943 2.42522e-100
BJ268428 whoh16p04 2002 5' Pistil at heading date 622bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 839 2.92958e-88
BJ272435 rwhoh11m10 2002 3' Pistil at heading date 604bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 649 2.91246e-66
BJ272954 rwhoh14l10 2002 3' Pistil at heading date 751bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 985 5.11714e-105
BJ275868 rwhoh14l21 2002 3' Pistil at heading date 174bp Contig16272 Contig16272 P06798 P06798 P06798 P06798 P06798 GO:0003677 GO:0003677 GO:0005634 GO:0006355 GO:0007275 DNA binding ,  DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent ,  development Hox-1.4 protein (147 AA) [Mus musculus] 73 9.65684
BJ273373 rwhoh16p04 2002 3' Pistil at heading date 728bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 899 4.47789e-95
BJ274696 rwhoh4f01 2002 3' Pistil at heading date 773bp Contig16272 Contig16272 Q9BQE3 GO:0005525 GTP binding tubulin alpha-3 chain [Oryza sativa (indica cultivar-group)] 640 2.41197e-87
BJ277696 whr12k09 2002 5' Root 466bp Contig16272 Contig16272 P46259 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 665 2.22248e-68
BJ277736 whr12n01 2002 5' Root 563bp Contig16272 Contig16272 Q9ZRB7 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 759 4.22524e-79
BJ277876 whr13h23 2002 5' Root 638bp Contig16272 Contig16272 Q96460 GO:0005525 GTP binding alpha tubulin-2A [Triticum aestivum] 961 2.18548e-102
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