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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 53
First Previous 1-53 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ209936 wh16g11 2002 5' Spike at meiosis 684bp Contig16104 Contig16104 Q03033 GO:0005525 GTP binding Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.12173e-64
BJ211340 wh30e05 2002 5' Spike at meiosis 493bp Contig16104 Contig16104 P27522 GO:0016020 membrane Os05g0160200 [Oryza sativa (japonica cultivar-group)] 333 3.34767e-46
BJ217370 rwh16g11 2002 3' Spike at meiosis 214bp Contig16104 Contig16104 Q9SJ12 P27923 GO:0005739 GO:0003735 mitochondrion ,  structural constituent of ribosome unknown [Zea mays] 132 1.3833e-06
BJ218777 rwh30e05 2002 3' Spike at meiosis 483bp Contig16104 Contig16104 P37225 P22277 GO:0005739 GO:0003735 mitochondrion ,  structural constituent of ribosome ubiquitin 365 1.33113e-33
BJ288754 whsl1e16 2002 5' Seed DPA30 685bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.18484e-64
BJ290763 whsl20c13 2002 5' Seed DPA30 222bp Contig16104 Contig16104 P03993 GO:0005634 nucleus hypothetical protein [Vitis vinifera] 212 4.08645e-21
BJ291330 whsl22m03 2002 5' Seed DPA30 465bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 303 2.04906e-26
BJ289167 whsl3l02 2002 5' Seed DPA30 576bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 4.0953e-64
BJ294473 rwhsl12p20 2002 3' Seed DPA30 430bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 313 1.44108e-27
BJ295035 rwhsl1e16 2002 3' Seed DPA30 698bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.43728e-64
BJ297370 rwhsl20c13 2002 3' Seed DPA30 421bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 511 1.60216e-50
BJ297950 rwhsl22m03 2002 3' Seed DPA30 473bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 345 2.81282e-31
BJ295468 rwhsl3l02 2002 3' Seed DPA30 554bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 475 3.50585e-46
BJ221900 whdl10g01 2002 5' Crown of seedling 462bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 493 1.90457e-48
BJ222878 whdl16j20 2002 5' Crown of seedling 602bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 4.58613e-64
BJ224457 whdl17n08 2002 5' Crown of seedling 391bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin extension protein [Capsicum annuum] 388 2.86219e-36
BJ225113 whdl20k14 2002 5' Crown of seedling 697bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin 623 4.17252e-63
BJ225601 whdl22p03 2002 5' Crown of seedling 639bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.26248e-64
BJ225907 whdl24f19 2002 5' Crown of seedling 541bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 3.47122e-64
BJ226866 rwhdl10g01 2002 3' Crown of seedling 386bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 336 3.08965e-30
BJ227894 rwhdl16j20 2002 3' Crown of seedling 308bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 313 1.42821e-27
BJ229918 rwhdl20k14 2002 3' Crown of seedling 675bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin 623 3.88617e-63
BJ230496 rwhdl22p03 2002 3' Crown of seedling 723bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 642 2.80541e-65
BJ230814 rwhdl24f19 2002 3' Crown of seedling 552bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 533 6.59643e-53
BJ228404 rwhdl6c21 2002 3' Crown of seedling 594bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 4.39504e-64
BJ237062 whe24e13 2002 5' Seed DPA10 323bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 292 3.95637e-25
BJ242601 rwhe24e13 2002 3' Seed DPA10 318bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 313 1.45818e-27
BJ243999 whf13l14 2002 5' Spike at flowering date 619bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin 623 3.22036e-63
BJ245372 whf19e09 2002 5' Spike at flowering date 637bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.19908e-64
BJ250005 rwhf14l14 2002 3' Spike at flowering date 276bp Contig16104 Contig16104 Q03557 Q03557 Q03557 GO:0005739 GO:0006412 GO:0016874 mitochondrion ,  protein biosynthesis ,  ligase activity      
BJ251250 rwhf19e09 2002 3' Spike at flowering date 606bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 625 1.76693e-63
BJ258958 whh14f04 2002 5' Spike at heading date 708bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.62661e-64
BJ256545 whh16p09 2002 5' Spike at heading date 470bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 502 1.76143e-49
BJ264426 rwhh14f04 2002 3' Spike at heading date 746bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 7.34968e-64
BJ262053 rwhh16p09 2002 3' Spike at heading date 484bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 508 3.47116e-50
BJ278175 whr15b05 2002 5' Root 684bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.12173e-64
BJ278858 whr18a15 2002 5' Root 711bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.65869e-64
BJ285985 rwhr13l14 2002 3' Root 604bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 313 2.66494e-27
BJ283227 rwhr15b05 2002 3' Root 700bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.43728e-64
BJ283905 rwhr18a15 2002 3' Root 701bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.50039e-64
BJ305029 whyd28g14 2002 5' Spikelet at late flowering 431bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 521 1.09575e-51
BJ304649 whyd7c08 2002 5' Spikelet at late flowering 713bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 6.65869e-64
BJ311566 rwhyd28g14 2002 3' Spikelet at late flowering 508bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 529 1.46263e-52
BJ310420 rwhyd7c08 2002 3' Spikelet at late flowering 667bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 639 5.19438e-65
BJ312437 whyf10b21 2002 5' Spikelet at early flowering 650bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.5161e-64
BJ316087 whyf21h17 2002 5' Spikelet at early flowering 531bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 626 9.58205e-64
BJ316364 whyf22m07 2002 5' Spikelet at early flowering 665bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin 611 9.16895e-62
BJ317690 whyf29l23 2002 5' Spikelet at early flowering 624bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 429 1.74923e-49
BJ313747 whyf7d11 2002 5' Spikelet at early flowering 697bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin 623 4.17252e-63
BJ313926 whyf8d11 2002 5' Spikelet at early flowering 553bp Contig16104 Contig16104 P22277 GO:0003735 structural constituent of ribosome ubiquitin 533 6.59643e-53
BJ318131 rwhyf10b21 2002 3' Spikelet at early flowering 619bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 4.90461e-64
BJ321578 rwhyf21h17 2002 3' Spikelet at early flowering 623bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.032e-64
BJ323269 rwhyf29l23 2002 3' Spikelet at early flowering 624bp Contig16104 Contig16104 P03993 GO:0005634 nucleus ubiquitin 623 3.26165e-63
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