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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 46
First Previous 1-46 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ208653 wh10c14 2002 5' Spike at meiosis 141bp Contig16041 Contig16041 Q03033 GO:0005525 GTP binding      
BJ213560 wh23b14 2002 5' Spike at meiosis 451bp Contig16041 Contig16041 O88703 GO:0005244 voltage-gated ion channel activity hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 300 4.66471e-26
BJ213819 wh24g12 2002 5' Spike at meiosis 609bp Contig16041 Contig16041 Q09638 GO:0007186 G-protein coupled receptor protein signaling pathway hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.4789e-33
BJ210222 wh9n11 2002 5' Spike at meiosis 594bp Contig16041 Contig16041 Q8Y3F3 GO:0016740 transferase activity hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.37897e-33
BJ221065 rwh23b14 2002 3' Spike at meiosis 494bp Contig16041 Contig16041 P51102 GO:0016491 oxidoreductase activity hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 376 7.36325e-35
BJ221321 rwh24g12 2002 3' Spike at meiosis 648bp Contig16041 Contig16041 Q05152 GO:0005216 ion channel activity hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.73071e-33
BJ216077 rwh9n11 2002 3' Spike at meiosis 672bp Contig16041 Contig16041 P27091 GO:0005125 cytokine activity hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.84153e-33
BJ222421 whdl13f11 2002 5' Crown of seedling 575bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.28493e-33
BJ226002 whdl24l07 2002 5' Crown of seedling 389bp Contig16041 Contig16041 P98160 P98160 GO:0005578 GO:0005604 extracellular matrix ,  basement membrane hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 210 1.2552e-15
BJ226272 whdl25m14 2002 5' Crown of seedling 648bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.73071e-33
BJ226275 whdl25m18 2002 5' Crown of seedling 141bp Contig16041 Contig16041 P43871 P43871 P43871 GO:0008168 GO:0009307 GO:0016740 methyltransferase activity ,  DNA restriction ,  transferase activity      
BJ227345 rwhdl13f11 2002 3' Crown of seedling 630bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.59146e-33
BJ230914 rwhdl24l07 2002 3' Crown of seedling 636bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.65114e-33
BJ231161 rwhdl25l07 2002 3' Crown of seedling 474bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 360 5.12616e-33
BJ231182 rwhdl25m14 2002 3' Crown of seedling 613bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.49888e-33
BJ231185 rwhdl25m18 2002 3' Crown of seedling 193bp Contig16041 Contig16041 P10105 P10105 P10105 P10105 P10105 GO:0003677 GO:0003677 GO:0005634 GO:0006355 GO:0007275 DNA binding ,  DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent ,  development hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 246 8.54664e-20
BJ235457 whe16l17 2002 5' Seed DPA10 645bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.69092e-33
BJ233585 whe6f23 2002 5' Seed DPA10 614bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 357 2.19324e-32
BJ233646 whe6j23 2002 5' Seed DPA10 346bp Contig16041 Contig16041 O42918 O42918 O42918 O42918 O42918 O42918 GO:0005509 GO:0005975 GO:0005975 GO:0007126 GO:0016787 GO:0016798 calcium ion binding ,  carbohydrate metabolism ,  carbohydrate metabolism ,  meiosis ,  hydrolase activity ,  hydrolase activity, acting on glycosyl bonds hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 282 5.73907e-24
BJ240678 rwhe16l17 2002 3' Seed DPA10 659bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.79039e-33
BJ239440 rwhe6f23 2002 3' Seed DPA10 603bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.45891e-33
BJ245922 whf20l20 2002 5' Spike at flowering date 663bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.81028e-33
BJ248873 whf8g13 2002 5' Spike at flowering date 666bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.80192e-33
BJ251838 rwhf20l20 2002 3' Spike at flowering date 633bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.61135e-33
BJ252672 rwhf25g24 2002 3' Spike at flowering date 437bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 402 6.83743e-38
BJ255126 rwhf8g13 2002 3' Spike at flowering date 590bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.35899e-33
BJ260352 whh24j10 2002 5' Spike at heading date 480bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 362 2.96544e-33
BJ260783 whh26n07 2002 5' Spike at heading date 650bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.73071e-33
BJ256153 whh4c23 2002 5' Spike at heading date 662bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.81028e-33
BJ266045 rwhh24j10 2002 3' Spike at heading date 581bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.32508e-33
BJ266473 rwhh26n07 2002 3' Spike at heading date 547bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.10929e-33
BJ266700 rwhh27o01 2002 3' Spike at heading date 142bp Contig16041 Contig16041 P10105 P10105 P10105 P10105 P10105 GO:0003677 GO:0003677 GO:0005634 GO:0006355 GO:0007275 DNA binding ,  DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent ,  development hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 163 3.51478e-10
BJ261688 rwhh4c23 2002 3' Spike at heading date 649bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.71082e-33
BJ277099 rwhoh27o02 2002 3' Pistil at heading date 670bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.84153e-33
BJ278808 whr17n08 2002 5' Root 644bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.69092e-33
BJ281229 whr21b13 2002 5' Root 704bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 2.05934e-33
BJ279519 whr3f12 2002 5' Root 662bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.81028e-33
BJ282908 rwhr12l14 2002 3' Root 438bp Contig16041 Contig16041 O42918 O42918 O42918 O42918 O42918 O42918 GO:0005509 GO:0005975 GO:0005975 GO:0007126 GO:0016787 GO:0016798 calcium ion binding ,  carbohydrate metabolism ,  carbohydrate metabolism ,  meiosis ,  hydrolase activity ,  hydrolase activity, acting on glycosyl bonds hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 352 4.27449e-32
BJ283857 rwhr17n08 2002 3' Root 683bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.92073e-33
BJ286288 rwhr21b13 2002 3' Root 658bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.79039e-33
BJ284502 rwhr3f12 2002 3' Root 666bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 382 3.28388e-35
BJ302218 whyd14c21 2002 5' Spikelet at late flowering 269bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 381 1.87967e-35
BJ302322 whyd14k21 2002 5' Spikelet at late flowering 627bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 357 2.26934e-32
BJ305802 whyd27j17 2002 5' Spikelet at late flowering 627bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.57157e-33
BJ308147 rwhyd14k21 2002 3' Spikelet at late flowering 665bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.80192e-33
BJ311394 rwhyd27j17 2002 3' Spikelet at late flowering 629bp Contig16041 Contig16041       hypothetical protein OsI_012667 [Oryza sativa (indica cultivar-group)] 367 1.59146e-33
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