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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 22
First Previous 1-22 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ208626 wh10a09 2002 5' Spike at meiosis 538bp Contig15481 Contig15481 P38548 GO:0006886 intracellular protein transport unknown [Zea mays] 123 2.06111e-05
BJ212842 wh19h02 2002 5' Spike at meiosis 517bp Contig15481 Contig15481 P51419 GO:0003735 structural constituent of ribosome unknown [Zea mays] 123 1.83159e-05
BJ207152 wh2g09 2002 5' Spike at meiosis 493bp Contig15481 Contig15481 P49100 GO:0016021 integral to membrane unknown [Zea mays] 123 1.55992e-05
BJ211132 wh37p13 2002 5' Spike at meiosis 386bp Contig15481 Contig15481 P55769 GO:0005634 nucleus unnamed protein product [Podospora anserina] 78 2.55105
BJ217464 rwh10a09 2002 3' Spike at meiosis 425bp Contig15481 Contig15481 P27807 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0000786 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 nucleosome ,  DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 116 0.000101338
BJ220317 rwh19h02 2002 3' Spike at meiosis 455bp Contig15481 Contig15481 P22807 GO:0007275 development unknown [Zea mays] 123 1.54672e-05
BJ214430 rwh2g09 2002 3' Spike at meiosis 433bp Contig15481 Contig15481 Q9SEE5 GO:0016740 transferase activity unknown [Zea mays] 123 1.55042e-05
BJ287710 whsl10i10 2002 5' Seed DPA30 246bp Contig15481 Contig15481 P02275 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0000786 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 nucleosome ,  DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unnamed protein product [Podospora anserina] 77 3.30502
BJ291903 whsl25f13 2002 5' Seed DPA30 148bp Contig15481 Contig15481       unknown [Zea mays] 115 0.000133515
BJ291992 whsl25n13 2002 5' Seed DPA30 494bp Contig15481 Contig15481 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 123 1.59991e-05
BJ294011 rwhsl10i10 2002 3' Seed DPA30 233bp Contig15481 Contig15481 P46585 P46585 P46585 P46585 GO:0000287 GO:0009165 GO:0016301 GO:0016740 magnesium ion binding ,  nucleotide biosynthesis ,  kinase activity ,  transferase activity unnamed protein product [Podospora anserina] 76 4.39026
BJ298600 rwhsl25n13 2002 3' Seed DPA30 454bp Contig15481 Contig15481 Q9VG98 GO:0016740 transferase activity unknown [Zea mays] 123 1.54672e-05
BJ241185 rwhe19d10 2002 3' Seed DPA10 432bp Contig15481 Contig15481       unknown [Zea mays] 123 1.55042e-05
BJ249539 rwhf11g02 2002 3' Spike at flowering date 434bp Contig15481 Contig15481 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 123 1.54392e-05
BJ256757 whh18a17 2002 5' Spike at heading date 519bp Contig15481 Contig15481 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 123 1.87141e-05
BJ262281 rwhh18a17 2002 3' Spike at heading date 520bp Contig15481 Contig15481 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 123 1.87141e-05
BJ277479 whr11k23 2002 5' Root 449bp Contig15481 Contig15481 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 123 1.56008e-05
BJ278095 whr14k01 2002 5' Root 433bp Contig15481 Contig15481 P53108 GO:0016021 integral to membrane unknown [Zea mays] 98 0.0122847
BJ282663 rwhr11k23 2002 3' Root 398bp Contig15481 Contig15481 Q11107 Q11107 Q11107 GO:0003677 GO:0005634 GO:0007275 DNA binding ,  nucleus ,  development unknown [Zea mays] 123 1.57054e-05
BJ283152 rwhr14k01 2002 3' Root 183bp Contig15481 Contig15481            
BJ304256 whyd23d19 2002 5' Spikelet at late flowering 334bp Contig15481 Contig15481       unknown [Zea mays] 123 1.53992e-05
BJ310203 rwhyd23d19 2002 3' Spikelet at late flowering 377bp Contig15481 Contig15481 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 Q97N44 GO:0003677 GO:0005524 GO:0006260 GO:0006281 GO:0006281 GO:0006974 GO:0009432 DNA binding ,  ATP binding ,  DNA replication ,  DNA repair ,  DNA repair ,  response to DNA damage stimulus ,  SOS response unknown [Zea mays] 92 0.0614434
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