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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 21
First Previous 1-21 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ212992 wh20e11 2002 5' Spike at meiosis 304bp Contig15399 Contig15399 P59258 GO:0005634 nucleus unknown [Zea mays] 230 1.24234e-31
BJ287914 whsl11k13 2002 5' Seed DPA30 579bp Contig15399 Contig15399 P23487 O82043 O82043 O82043 O82043 GO:0007275 GO:0000287 GO:0009082 GO:0009507 GO:0016491 development ,  magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity Os05g0573700 [Oryza sativa (japonica cultivar-group)] 850 1.28399e-89
BJ288040 whsl12g19 2002 5' Seed DPA30 611bp Contig15399 Contig15399 P22739 Q05758 Q05758 Q05758 Q05758 GO:0016021 GO:0000287 GO:0009082 GO:0009507 GO:0016491 integral to membrane ,  magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity hypothetical protein OsI_020350 [Oryza sativa (indica cultivar-group)] 833 1.38032e-87
BJ293854 whsl32i13 2002 5' Seed DPA30 605bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity hypothetical protein OsI_020350 [Oryza sativa (indica cultivar-group)] 840 2.07274e-88
BJ294232 rwhsl11k13 2002 3' Seed DPA30 628bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 738 1.52015e-76
BJ221951 whdl10l08 2002 5' Crown of seedling 490bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity hypothetical protein OsJ_018840 [Oryza sativa (japonica cultivar-group)] 708 2.28283e-73
BJ226930 rwhdl10l08 2002 3' Crown of seedling 533bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity chloroplast reductoisomerase precursor [Oryza sativa (indica cultivar-group)] 575 7.82119e-58
BJ231987 whe10h03 2002 5' Seed DPA10 369bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity Os05g0573700 [Oryza sativa (japonica cultivar-group)] 536 1.96097e-53
BJ235092 whe15c18 2002 5' Seed DPA10 562bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity Os05g0573700 [Oryza sativa (japonica cultivar-group)] 814 1.74156e-85
BJ236598 whe22f06 2002 5' Seed DPA10 659bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 857 2.7177e-90
BJ237597 rwhe10h03 2002 3' Seed DPA10 682bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 885 1.63468e-93
BJ241853 rwhe22f06 2002 3' Seed DPA10 690bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 867 2.08153e-91
BJ245947 whf20n09 2002 5' Spike at flowering date 668bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity Os05g0573700 [Oryza sativa (japonica cultivar-group)] 878 1.47156e-95
BJ246228 whf22a06 2002 5' Spike at flowering date 557bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity chloroplast reductoisomerase precursor [Oryza sativa (indica cultivar-group)] 577 5.30446e-58
BJ247492 whf2h03 2002 5' Spike at flowering date 619bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 741 6.68379e-77
BJ251863 rwhf20n09 2002 3' Spike at flowering date 638bp Contig15399 Contig15399 O82043 O82043 O82043 O82043 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity chloroplast reductoisomerase precursor [Oryza sativa (indica cultivar-group)] 756 1.2902e-78
BJ252158 rwhf22a06 2002 3' Spike at flowering date 508bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity chloroplast reductoisomerase precursor [Oryza sativa (indica cultivar-group)] 577 3.97389e-58
BJ252215 rwhf22e06 2002 3' Spike at flowering date 370bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 297 1.01416e-25
BJ253564 rwhf2h03 2002 3' Spike at flowering date 641bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity hypothetical protein OsI_020350 [Oryza sativa (indica cultivar-group)] 483 1.05125e-74
BJ278714 whr17h17 2002 5' Root 242bp Contig15399 Contig15399 Q01292 Q01292 Q01292 Q01292 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity hypothetical protein [Vitis vinifera] 157 7.60232e-11
BJ285631 rwhr9d09 2002 3' Root 302bp Contig15399 Contig15399 Q05758 Q05758 Q05758 Q05758 GO:0000287 GO:0009082 GO:0009507 GO:0016491 magnesium ion binding ,  branched chain family amino acid biosynthesis ,  chloroplast ,  oxidoreductase activity unknown [Zea mays] 213 5.67033e-16
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