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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 29
First Previous 1-29 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_20022_l07f 2012 5' Callus 440bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.86366e-54
whcs_20022_l08f 2012 5' Callus 438bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.86366e-54
whdl_9049_a10r 2012 3' Crown of seedling 438bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.8306e-55
whdl_5032_p02r 2012 3' Crown of seedling 518bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 3.785e-59
whh_11009_c13r 2012 3' Spike at heading date 448bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.16605e-49
whkp_15036_m11r 2012 3' Shoot grown under continuous light 461bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.03397e-58
whkp_15036_m12r 2012 3' Shoot grown under continuous light 138bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 2.26425e-13
whoh_12017_a08r 2012 3' Pistil at heading date 431bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.16287e-55
whoh_11055_m04f 2012 5' Pistil at heading date 560bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 2.16391e-59
whoh_11056_m04r 2012 3' Pistil at heading date 290bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.67492e-25
whr_17019_e08f 2012 5' Root 344bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 4.48264e-49
whr_9055_m16f 2012 5' Root 491bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.97037e-54
whrd_10031_a06f 2012 5' Root of dessiccated seed 501bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.88853e-54
whrd_10031_a06r 2012 3' Root of dessiccated seed 465bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.06192e-58
whsc_14078_c19f 2012 5' Shoot grown with cold treatment 526bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.14829e-58
whsc_20028_f08f 2012 5' Shoot grown with cold treatment 592bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.65447e-58
whsc_5001_o01f 2012 5' Shoot grown with cold treatment 410bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 3.73464e-32
whsc_5001_o01r 2012 3' Shoot grown with cold treatment 384bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.62574e-35
whxb_20048_b12f 2012 5' Root 199bp Contig5244            
whxb_20048_b12r 2012 3' Root 175bp Contig5244            
whxb_12073_h17f 2012 5' Root 477bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 206 2.09739e-51
whxb_12073_h17r 2012 3' Root 459bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.03853e-58
whxb_38071_i18r 2012 3' Root 115bp Contig5244            
whxb_39035_n09r 2012 3' Root 450bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 1.12941e-44
whxd_39047_b10f 2012 5' Root, treated at 50 microM Al for 6h 494bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.05228e-50
whxd_39047_b10r 2012 3' Root, treated at 50 microM Al for 6h 457bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 3.69373e-56
HX010826 whxj_12047_b10f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 449bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.06855e-50
HX010839 whxj_12047_b10r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 457bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 5.35714e-55
whyd_8036_f21r 2012 3' Spikelet at late flowering 538bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 216 2.44475e-54
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