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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 12
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ213849 wh24i19 2002 5' Spike at meiosis 394bp Contig14563 Contig14563 P70060 GO:0007275 development Os04g0665700 [Oryza sativa (japonica cultivar-group)] 481 4.70686e-47
BJ221344 rwh24i19 2002 3' Spike at meiosis 146bp Contig14563 Contig14563 P33126 Q00056 Q00056 Q00056 Q00056 Q00056 GO:0003754 GO:0003677 GO:0003677 GO:0005634 GO:0006355 GO:0007275 chaperone activity ,  DNA binding ,  DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent ,  development unknown [Zea mays] 73 9.93228
BJ217917 rwh29c14 2002 3' Spike at meiosis 515bp Contig14563 Contig14563 P06971 P47973 P47973 GO:0006826 GO:0003677 GO:0005634 iron ion transport ,  DNA binding ,  nucleus unknown [Zea mays] 388 3.42234e-36
BJ287670 whsl10e12 2002 5' Seed DPA30 658bp Contig14563 Contig14563 Q96250 P47979 P47979 GO:0005739 GO:0003677 GO:0005634 mitochondrion ,  DNA binding ,  nucleus hypothetical protein OsJ_015805 [Oryza sativa (japonica cultivar-group)] 698 7.35279e-72
BJ288090 whsl12l19 2002 5' Seed DPA30 550bp Contig14563 Contig14563 Q9M352 P23949 P23949 GO:0003735 GO:0003677 GO:0005634 structural constituent of ribosome ,  DNA binding ,  nucleus Os04g0665700 [Oryza sativa (japonica cultivar-group)] 654 5.93358e-67
BJ293635 whsl17h11 2002 5' Seed DPA30 507bp Contig14563 Contig14563 O58760 P23949 P23949 GO:0006810 GO:0003677 GO:0005634 transport ,  DNA binding ,  nucleus Os04g0665700 [Oryza sativa (japonica cultivar-group)] 619 5.38273e-63
BJ291440 whsl23d02 2002 5' Seed DPA30 462bp Contig14563 Contig14563 P23949 P23949 GO:0003677 GO:0005634 DNA binding ,  nucleus Os04g0665700 [Oryza sativa (japonica cultivar-group)] 563 1.4549e-56
BJ293968 rwhsl10e12 2002 3' Seed DPA30 757bp Contig14563 Contig14563 P47977 P47977 GO:0003677 GO:0005634 DNA binding ,  nucleus hypothetical protein OsJ_015805 [Oryza sativa (japonica cultivar-group)] 651 2.76806e-66
BJ300084 rwhsl17h11 2002 3' Seed DPA30 695bp Contig14563 Contig14563 P22893 P22893 GO:0003677 GO:0005634 DNA binding ,  nucleus unknown [Zea mays] 412 1.21051e-38
BJ298061 rwhsl23d02 2002 3' Seed DPA30 653bp Contig14563 Contig14563 P47973 P47973 GO:0003677 GO:0005634 DNA binding ,  nucleus unknown [Zea mays] 534 7.55843e-53
BJ233301 whe4a23 2002 5' Seed DPA10 612bp Contig14563 Contig14563 P47973 P47973 GO:0003677 GO:0005634 DNA binding ,  nucleus hypothetical protein OsJ_015805 [Oryza sativa (japonica cultivar-group)] 607 2.24869e-61
BJ238950 rwhe4a23 2002 3' Seed DPA10 774bp Contig14563 Contig14563 P47977 P47977 GO:0003677 GO:0005634 DNA binding ,  nucleus hypothetical protein OsJ_015805 [Oryza sativa (japonica cultivar-group)] 625 2.96993e-63
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