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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 132
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_20088_i24f 2012 5' 414bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.51134e-25
whca_20088_i24r 2012 3' 387bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04777e-26
whca_20086_k24f 2012 5' 414bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.51134e-25
whca_20086_k24r 2012 3' 387bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04777e-26
whca_20052_m16f 2012 5' 416bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.96846e-25
whca_20052_m16r 2012 3' 388bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04777e-26
whdl_6073_c05f 2012 5' Crown of seedling 438bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.97406e-25
whdl_6073_c05r 2012 3' Crown of seedling 368bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04157e-26
whdl_13010_d19f 2012 5' Crown of seedling 445bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06661e-26
whdl_13010_d19r 2012 3' Crown of seedling 423bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.6452e-28
whdl_16059_g22r 2012 3' Crown of seedling 64bp Contig5031            
whdl_15087_m24f 2012 5' Crown of seedling 437bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 6.35032e-24
whdp_1061_d14r 2012 3' Seed DPA20 282bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 96 3.96166e-18
whdp_15066_p19f 2012 5' Seed DPA20 495bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.05153e-26
whdp_15066_p19r 2012 3' Seed DPA20 486bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.49435e-28
whe_6075_g05f 2012 5' Seed DPA10 539bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 5.1332e-28
whe_6075_g05r 2012 3' Seed DPA10 504bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.52272e-29
whe_14040_m03f 2012 5' Seed DPA10 539bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 5.1332e-28
whe_16032_p20f 2012 5' Seed DPA10 461bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04361e-26
whe_16032_p20r 2012 3' Seed DPA10 459bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04821e-26
whei_4054_k15f 2012 5' Dormant seed with water absorption after breaking 507bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06855e-26
whei_4054_k15r 2012 3' Dormant seed with water absorption after breaking 480bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.57474e-29
whf_20042_d03f 2012 5' Spike at flowering date 380bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 107 1.75201e-21
whf_20042_d03r 2012 3' Spike at flowering date 389bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.55573e-28
whf_17003_e01f 2012 5' Spike at flowering date 424bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06912e-26
whf_17003_e01r 2012 3' Spike at flowering date 373bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.07313e-26
whf_21047_o21f 2012 5' Spike at flowering date 504bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06855e-26
whf_21048_o21r 2012 3' Spike at flowering date 419bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 122 5.32818e-26
whh_20066_a17r 2012 3' Spike at heading date 52bp Contig5031            
whh_20022_i20f 2012 5' Spike at heading date 415bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 81 7.75872e-14
whh_16086_j18f 2012 5' Spike at heading date 546bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.2846e-26
whh_16086_j18r 2012 3' Spike at heading date 164bp Contig5031            
whhg_3091_e21f 2012 5' Anther at meiosis of MT4B CS wheat 450bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06201e-26
whhg_3091_e21r 2012 3' Anther at meiosis of MT4B CS wheat 414bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.57417e-29
whhg_19083_n22f 2012 5' Anther at meiosis of MT4B CS wheat 496bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 104 8.62203e-21
whhg_19083_n22r 2012 3' Anther at meiosis of MT4B CS wheat 499bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04668e-26
whkp_12035_m10f 2012 5' Shoot grown under continuous light 460bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04821e-26
whkp_12035_m10r 2012 3' Shoot grown under continuous light 427bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.62147e-28
whms_11058_g16f 2012 5' Seed DPA5 of DT3DL CS wheat 406bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.00129e-25
whms_11058_g16r 2012 3' Seed DPA5 of DT3DL CS wheat 367bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04157e-26
whms_19017_p05f 2012 5' Seed DPA5 of DT3DL CS wheat 510bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.0586e-26
whms_19017_p05r 2012 3' Seed DPA5 of DT3DL CS wheat 501bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.52272e-29
whok_4016_a03f 2012 5' Seed DPA5 547bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.31082e-26
whok_4016_a03r 2012 3' Seed DPA5 520bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.11153e-26
whok_9032_b08f 2012 5' Seed DPA5 516bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.11153e-26
whok_9032_b08r 2012 3' Seed DPA5 493bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.68139e-29
whok_12067_m18f 2012 5' Seed DPA5 577bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.53943e-26
whok_12067_m18r 2012 3' Seed DPA5 545bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.2846e-26
whpc_10050_p16f 2012 5' Anther at meiosis 507bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06855e-26
whpc_10050_p16r 2012 3' Anther at meiosis 479bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.55799e-28
whr_17017_a02f 2012 5' Root 513bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.61318e-28
whr_17017_a02r 2012 3' Root 441bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 2.81898e-27
whr_17049_a04f 2012 5' Root 533bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 9.91208e-29
whr_17049_a04r 2012 3' Root 467bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.6582e-28
whrd_12038_l11f 2012 5' Root of dessiccated seed 468bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.00353e-25
whrd_12038_l11r 2012 3' Root of dessiccated seed 440bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04226e-26
whrd_14070_l19f 2012 5' Root of dessiccated seed 562bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.7193e-25
whrd_14070_l19r 2012 3' Root of dessiccated seed 539bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.26435e-26
whrd_8036_n11f 2012 5' Root of dessiccated seed 487bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06608e-26
whrd_8036_n11r 2012 3' Root of dessiccated seed 472bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.60809e-28
whsc_11076_e20r 2012 3' Shoot grown with cold treatment 537bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 1.01276e-28
whsc_9054_l16f 2012 5' Shoot grown with cold treatment 507bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06855e-26
whsc_9054_l16r 2012 3' Shoot grown with cold treatment 479bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.57474e-29
whsp_11047_a09f 2012 5' 428bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06016e-26
whsp_11047_a09r 2012 3' 406bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.60376e-28
whsp_11047_a10f 2012 5' 428bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06016e-26
whsp_11047_a10r 2012 3' 405bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.60376e-28
whsp_12048_b12r 2012 3' 44bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.193323
whv3_20012_e03f 2012 5' Shoot grown under cold condition for 3days 449bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06201e-26
whv3_20012_e03r 2012 3' Shoot grown under cold condition for 3days 420bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.78253e-29
whv3_16057_g14f 2012 5' Shoot grown under cold condition for 3days 561bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.41568e-26
whv3_16057_g14r 2012 3' Shoot grown under cold condition for 3days 524bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 6.00581e-28
whva_11081_o21r 2012 3' Shoot with ABA treatment 475bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.61339e-29
whvd_7030_c08f 2012 5' Shoot grown with dessication 353bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 86 4.18621e-15
whvd_7030_c08r 2012 3' Shoot grown with dessication 313bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 94 1.51098e-17
whvh_6068_n20f 2012 5' Shoot with heat shock treatment 482bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04347e-26
whxa_29085_l22f 2012 5' Root 428bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06016e-26
whxa_29085_l22r 2012 3' Root 305bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 98 8.07108e-19
whxb_10076_f19f 2012 5' Root 100bp Contig5031            
whxb_9076_f19f 2012 5' Root 428bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06016e-26
whxb_9076_f19r 2012 3' Root 385bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.05622e-26
whxb_7023_i06f 2012 5' Root 478bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.04819e-26
whxb_7023_i06r 2012 3' Root 354bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 113 1.86751e-23
whxb_10086_l23f 2012 5' Root 450bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.61088e-25
whxb_10086_l23r 2012 3' Root 329bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 70 1.81263e-10
whxc_14079_b18f 2012 5' Root, treated at 50 microM Al for 6h 488bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 6.91011e-26
whxc_14079_b18r 2012 3' Root, treated at 50 microM Al for 6h 463bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 3.68378e-27
whxc_2041_g10f 2012 5' Root, treated at 50 microM Al for 6h 498bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.05153e-26
whxc_2041_g10r 2012 3' Root, treated at 50 microM Al for 6h 489bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.72106e-29
whxc_13008_i04f 2012 5' Root, treated at 50 microM Al for 6h 492bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.05638e-26
whxc_14008_i04f 2012 5' Root, treated at 50 microM Al for 6h 493bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.05638e-26
whxc_13008_i04r 2012 3' Root, treated at 50 microM Al for 6h 465bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.07181e-26
whxc_14008_i04r 2012 3' Root, treated at 50 microM Al for 6h 467bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06709e-26
whxc_10052_m15f 2012 5' Root, treated at 50 microM Al for 6h 394bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.07423e-26
whxc_10052_m15r 2012 3' Root, treated at 50 microM Al for 6h 363bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.54462e-28
whxd_2013_c02f 2012 5' Root, treated at 50 microM Al for 6h 399bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 116 3.80523e-24
whxd_2013_c02r 2012 3' Root, treated at 50 microM Al for 6h 373bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.0689e-26
whxd_29094_d23f 2012 5' Root, treated at 50 microM Al for 6h 372bp Contig5031       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.69057e-25
whxd_29094_d23r 2012 3' Root, treated at 50 microM Al for 6h 294bp Contig5031       Os03g0606100[OryzasativaJaponicaGroup] 37 1.71553
whxd_8006_l03f 2012 5' Root, treated at 50 microM Al for 6h 313bp Contig5031       mitochondrialATPsynthase6kDasubunit[Triticumaestivum] 55 5.95556e-06
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