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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 74
First Previous 1-74 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_2068_m19f 2012 5' Callus 605bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 9.72027e-78
whcs_2068_m19r 2012 3' Callus 539bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 1.05555e-73
whdl_15042_d15r 2012 3' Crown of seedling 391bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 1.82925e-47
whdl_5012_h13r 2012 3' Crown of seedling 512bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 2.57736e-65
whdl_11077_k17f 2012 5' Crown of seedling 255bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 1.70626e-40
whdl_9024_n20r 2012 3' Crown of seedling 498bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 6.27678e-64
whe_14021_f14f 2012 5' Seed DPA10 435bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 1.59937e-75
whe_15021_f14r 2012 3' Seed DPA10 83bp Contig4628            
whei_9043_e09r 2012 3' Dormant seed with water absorption after breaking 182bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.45446e-25
whei_8091_f22f 2012 5' Dormant seed with water absorption after breaking 555bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 3.77995e-77
whei_8091_f22r 2012 3' Dormant seed with water absorption after breaking 529bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 6.47515e-78
whf_13049_a22f 2012 5' Spike at flowering date 414bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 5.37052e-31
whhg_12085_l21f 2012 5' Anther at meiosis of MT4B CS wheat 574bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 8.45485e-78
whhg_12085_l21r 2012 3' Anther at meiosis of MT4B CS wheat 629bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.08809e-77
whms_15012_e04f 2012 5' Seed DPA5 of DT3DL CS wheat 611bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.00104e-77
whms_15012_e04r 2012 3' Seed DPA5 of DT3DL CS wheat 621bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.05907e-77
whms_1051_m13f 2012 5' Seed DPA5 of DT3DL CS wheat 548bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 7.3234e-78
whms_1051_m13r 2012 3' Seed DPA5 of DT3DL CS wheat 574bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 7.9135e-76
whoh_27086_j18f 2012 5' Pistil at heading date 422bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 8.92553e-74
whoh_27086_j18r 2012 3' Pistil at heading date 480bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.31068e-61
whoh_21062_l10f 2012 5' Pistil at heading date 258bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.28004e-35
whoh_21062_l10r 2012 3' Pistil at heading date 428bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 2.58117e-65
whok_10030_c07f 2012 5' Seed DPA5 584bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 6.37256e-76
whok_9030_c07f 2012 5' Seed DPA5 419bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.53239e-65
whok_9030_c07r 2012 3' Seed DPA5 306bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 3.39885e-09
whok_9083_m22f 2012 5' Seed DPA5 658bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.21283e-77
whok_9083_m22r 2012 3' Seed DPA5 628bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.08809e-77
whpc_6079_b18f 2012 5' Anther at meiosis 636bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.11176e-77
whpc_6079_b18r 2012 3' Anther at meiosis 651bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 5.14752e-73
whr_12049_a16f 2012 5' Root 350bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 3.28373e-60
whr_12049_a16r 2012 3' Root 396bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.29654e-53
whr_13049_a22r 2012 3' Root 377bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 158 8.68942e-37
whr_13006_j13r 2012 3' Root 361bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.97215e-05
whsc_4043_e09f 2012 5' Shoot grown with cold treatment 636bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.09732e-77
whsc_4043_e09r 2012 3' Shoot grown with cold treatment 599bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 9.43011e-78
whsl_23029_k08f 2012 5' Seed DPA30 311bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 5.34923e-31
whsl_23029_k08r 2012 3' Seed DPA30 362bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 168 8.27936e-40
whsl_21031_l14f 2012 5' Seed DPA30 311bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.65366e-51
whsl_21030_l14r 2012 3' Seed DPA30 55bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.55373
whsl_6048_p03f 2012 5' Seed DPA30 518bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 6.21e-78
whsl_6048_p03r 2012 3' Seed DPA30 543bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.19412e-64
whvd_7085_k22f 2012 5' Shoot grown with dessication 635bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.09732e-77
whvd_7085_k22r 2012 3' Shoot grown with dessication 603bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 9.72027e-78
whvs_2082_p23f 2012 5' Liquid cultured tissue 730bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.51574e-77
whvs_2082_p23r 2012 3' Liquid cultured tissue 651bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 1.76918e-73
whxa_1027_f05f 2012 5' Root 639bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.11176e-77
whxa_1028_f07f 2012 5' Root 560bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 7.90927e-78
whxa_1028_f07r 2012 3' Root 603bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 9.57519e-78
whxa_24007_j02f 2012 5' Root 605bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 9.72027e-78
whxb_10013_d01f 2012 5' Root 397bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 158 8.73189e-37
whxb_10013_d01r 2012 3' Root 334bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 9.78028e-41
whxb_6086_k24f 2012 5' Root 578bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 8.60062e-78
whxb_6086_k24r 2012 3' Root 313bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 68 8.84601e-10
whxb_6038_l11f 2012 5' Root 408bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.091e-63
whxb_6038_l11r 2012 3' Root 183bp Contig4628            
whxd_11028_e07f 2012 5' Root, treated at 50 microM Al for 6h 549bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 7.3234e-78
whxd_11028_e07r 2012 3' Root, treated at 50 microM Al for 6h 617bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.03006e-77
whxg_37042_h11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 401bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.2875e-64
whxg_3052_m15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 641bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.1262e-77
whxg_3052_m15r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 642bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.14063e-77
whxh_18020_m07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 543bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 7.17693e-78
whxh_18020_m07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 620bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.04457e-77
whxh_18020_m08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 542bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 3.57877e-77
whxh_18020_m08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 638bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.11176e-77
HX124776 whxr_17016_a03r 2012 3' Roots, 18 day old plants were grown hydroponically 391bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 7.71651e-46
whyd_15042_d15f 2012 5' Spikelet at late flowering 549bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 7.3234e-78
whyd_15042_d15r 2012 3' Spikelet at late flowering 550bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 2.74936e-72
whyd_3074_d17f 2012 5' Spikelet at late flowering 435bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 1.59937e-75
whyd_3075_d17r 2012 3' Spikelet at late flowering 435bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 6.33326e-48
whyd_8003_e07r 2012 3' Spikelet at late flowering 494bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.32092e-61
whyd_18008_n01f 2012 5' Spikelet at late flowering 546bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 1.76774e-76
whyd_18017_n01r 2012 3' Spikelet at late flowering 401bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.27793e-53
whyd_9101_p12f 2012 5' Spikelet at late flowering 503bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 1.64033e-72
whyd_9101_p12r 2012 3' Spikelet at late flowering 440bp Contig4628       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.22819e-53
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