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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 19
First Previous 1-19 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_5015_b02f 2012 5' Callus 673bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 462 3.50605e-128
whcs_3026_g07f 2012 5' Callus 737bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 462 4.28208e-128
whdl_6049_a04f 2012 5' Crown of seedling 440bp Contig3783       unnamedproteinproduct[Vitisvinifera] 307 6.64694e-82
whdl_10061_k10f 2012 5' Crown of seedling 93bp Contig3783       PREDICTED:tubulinbeta-1chain-like[Brachypodiumdistachyon] 75 7.28482e-12
whe_2036_f21f 2012 5' Seed DPA10 583bp Contig3783       Tubulinbetachain[Medicagotruncatula] 375 5.17694e-102
whem_20089_g21f 2012 5' Dormant seed with water absorption 534bp Contig3783       PREDICTED:tubulinbeta-1chain-like[Brachypodiumdistachyon] 362 2.64356e-98
whoh_8032_p20f 2012 5' Pistil at heading date 470bp Contig3783       unnamedproteinproduct[Vitisvinifera] 331 7.47346e-89
whok_4047_a10f 2012 5' Seed DPA5 705bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 447 1.31304e-123
whok_1006_l04f 2012 5' Seed DPA5 456bp Contig3783       putativebeta-5tubulin,partial[Tetragoniatetragonioides] 314 5.49258e-84
whok_3004_m03f 2012 5' Seed DPA5 606bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 379 3.91902e-103
whpc_2006_k04f 2012 5' Anther at meiosis 642bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 428 8.52356e-118
whr_1031_l20f 2012 5' Root 496bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 308 3.93146e-82
whsc_4061_c14f 2012 5' Shoot grown with cold treatment 633bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 407 1.49708e-111
whv3_7058_h15f 2012 5' Shoot grown under cold condition for 3days 702bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 445 6.38492e-123
whvs_2073_h17f 2012 5' Liquid cultured tissue 679bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 428 9.67881e-118
whxa_6093_d22f 2012 5' Root 123bp Contig3783       putativebeta-5tubulin,partial[Tetragoniatetragonioides] 86 4.19014e-15
whxa_18024_i08f 2012 5' Root 677bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 442 3.79726e-122
whyd_23059_g04f 2012 5' Spikelet at late flowering 57bp Contig3783       unknown[Medicagotruncatula] 43 0.0181695
whyd_6093_h06f 2012 5' Spikelet at late flowering 625bp Contig3783       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 390 1.85218e-106
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